Grant: Alliance Grants
University of Windsor
$50,000.00
Alternative attacks against SARS-CoV-2 proteins: Identifying and developing orthogonal therapeutic strategies using computational structural biology and synthetic chemistry_x000d_ _x000d_ _x000d_ _x000d_
FY 2020-21
Summary
This project is a collaboration between the Trant research group at the University of Windsor, which focuses on computational and synthetic medicinal chemistry (with particular focus on the development of cyclic peptide and carbohydrate-based therapeutics); and Devonian Health Group (DHG), a Montreal-based pharmaceutical company. SARS-CoV-2, the causative agent for COVID-19, is essentially a self-replicating machine made up of proteins and lipids. The proteins have all been identified, and recent work has shown that many of them interact with human proteins when they are in an infected cell. These interactions could provide the basis for designing drugs that can bind to the SARS-CoV-2 proteins, preventing them from doing their job. Many of the immediate efforts are aimed at repurposing approved drugs, but the SARS-CoV-2 proteins are very different from the normal targets of these drugs; one of the major challenges is that these proteins lack well-defined pockets and clefts that are the normal targets of normal drugs, and many are coated in sugars that make the surface challenging to access for antibodies and drugs. However, they are perfect targets for unconventional approaches such as cyclic peptides and repurposed proteins. The Trant group is using a combination of computational modeling to understand the interactions between these proteins and small molecules with the eventual dual goals of developing therapeutics and providing a better understanding of SARS-CoV-2 molecular biology. Trant and DHG already have an active collaboration in antimicrobial science and will be leveraging this connection to further investigate and develop any molecules identified by the team. SARS-CoV-2 is a challenging target, and we will need to explore all options for treatment, including innovative biologics that we will be investigating in this project, so that we as Canadians can safely and confidently resume our normal lives.
Program
Alliance Grants
Recipient
Location
Ontario, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data
As published
Application id
553704-2020
Name nom
Trant, John
Department département
Chemistry and Biochemistry
Organization id
37
Institution établissement
University of Windsor
Province en
Ontario
Province fr
Ontario
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2020
Competition year année de concours
2020
Award amount
50000
Program id
ALLRP
Program name en
Alliance Grants
Program name fr
Subventions Alliance
Group en
Research partnerships programs
Group fr
Programmes de partenariat
Committee code
96
Committee name en
RPP Internal Decision Cttee
Committee name fr
Cté de décision interne - PPR
Area of application code
504
Area of application group en
Manufacturing processes and products
Area of application group fr
Procédés et produits industriels
Area of application en
Human pharmaceuticals
Area of application fr
Produits pharmaceutiques administrables à l'homme
Research subject code
5403
Research subject group en
Biochemistry
Research subject group fr
Biochimie
Research subject en
Proteins and peptides, amino acids
Research subject fr
Protéines et peptides, acides aminés
Installment
inst:1 - 1
Partie
1
Nb partie
1
Application title
Alternative attacks against SARS-CoV-2 proteins: Identifying and developing orthogonal therapeutic strategies using computational structural biology and synthetic chemistry_x000d_
_x000d_
_x000d_
_x000d_
Keyword
NSERC
Application summary
This project is a collaboration between the Trant research group at the University of Windsor, which focuses on computational and synthetic medicinal chemistry (with particular focus on the development of cyclic peptide and carbohydrate-based therapeutics); and Devonian Health Group (DHG), a Montreal-based pharmaceutical company. SARS-CoV-2, the causative agent for COVID-19, is essentially a self-replicating machine made up of proteins and lipids. The proteins have all been identified, and recent work has shown that many of them interact with human proteins when they are in an infected cell. These interactions could provide the basis for designing drugs that can bind to the SARS-CoV-2 proteins, preventing them from doing their job. Many of the immediate efforts are aimed at repurposing approved drugs, but the SARS-CoV-2 proteins are very different from the normal targets of these drugs; one of the major challenges is that these proteins lack well-defined pockets and clefts that are the normal targets of normal drugs, and many are coated in sugars that make the surface challenging to access for antibodies and drugs. However, they are perfect targets for unconventional approaches such as cyclic peptides and repurposed proteins. The Trant group is using a combination of computational modeling to understand the interactions between these proteins and small molecules with the eventual dual goals of developing therapeutics and providing a better understanding of SARS-CoV-2 molecular biology. Trant and DHG already have an active collaboration in antimicrobial science and will be leveraging this connection to further investigate and develop any molecules identified by the team. SARS-CoV-2 is a challenging target, and we will need to explore all options for treatment, including innovative biologics that we will be investigating in this project, so that we as Canadians can safely and confidently resume our normal lives.