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Grant: Doctoral: Vanier Canada Graduate Scholarships

University of Alberta

$150,000.00

Bioinformatic, transcriptomic, and functional characterization of novel membrane trafficking genes in apicomplexan parasites and elucidation of their potential role in host cell invasion.

FY 2015-16

Summary
The term Apicomplexa refers to a group of prolific parasites, including the causative agents of malaria and toxoplasmosis, which represent threats both in Canada and globally. Apicomplexan cells contain compartments known as organelles, which act like miniature shipping centres where cargo can be stored, sorted, and sent to other centres via mobile carriers. Transport between centres is known as membrane trafficking and requires specialized cellular machinery to ensure function and specificity. Though many of these compartments are similar to those found in our own cells, Apicomplexa possess several compartments that are unique to this group, known collectively as "invasion organelles". These organelles are used like harpoons during the process of host invasion; the parasite fires at the host cell, penetrates it, and then pulls itself inside. However, once these harpoons are launched, they are effectively spent, and the parasite must rebuild its arsenal during its residence in the host cell. This crucial process of forming new invasion organelles relies on the membrane trafficking system. If this process is disrupted in any way, the invasion organelles are not formed, and the parasite cannot invade new host cells. Without the ability to hide in host cells, the parasite succumbs quickly to host immune responses or starvation. Despite the importance of membrane trafficking for parasite survival, a full picture of this system is still emerging. Using advanced computational methods, I will identify trafficking machinery encoded in the genomes of these parasites. Working with international collaborators, I will further characterize these genes using transcriptomic (gene expression) and cell biological (gene function) approaches to determine which genes are involved in this critical trafficking process. This project will significantly enhance understanding of an essential process in a group of deadly parasites important both globally, and here in Canada.
Program
Doctoral: Vanier Canada Graduate Scholarships
Location
Alberta, Canada
Recipient Type
Academia
Type
Grant
Source
CIHR Funding Decisions Database

As published

Id
339622
Name
Klinger Christen M
Region
Alberta
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Infection and Immunity
Theme2
Biomedical
Prcname2
Vanier Canada Graduate Scholarships CIHR
Projecttitle
Bioinformatic, transcriptomic, and functional characterization of novel membrane trafficking genes in apicomplexan parasites and elucidation of their potential role in host cell invasion.
Programtype2
Studentship Programs
Orgnameinp2
University of Alberta
Cihramount2
$150,000
Cihrequipment2
$0
Programname2
Doctoral: Vanier Canada Graduate Scholarships
Keyworddelim
Bioinformatics; Membrane Trafficking; Molecular Cell Biology; Multidisciplinary; Parasitism; Transcriptomics
Abstract
The term Apicomplexa refers to a group of prolific parasites, including the causative agents of malaria and toxoplasmosis, which represent threats both in Canada and globally. Apicomplexan cells contain compartments known as organelles, which act like miniature shipping centres where cargo can be stored, sorted, and sent to other centres via mobile carriers. Transport between centres is known as membrane trafficking and requires specialized cellular machinery to ensure function and specificity. Though many of these compartments are similar to those found in our own cells, Apicomplexa possess several compartments that are unique to this group, known collectively as "invasion organelles". These organelles are used like harpoons during the process of host invasion; the parasite fires at the host cell, penetrates it, and then pulls itself inside. However, once these harpoons are launched, they are effectively spent, and the parasite must rebuild its arsenal during its residence in the host cell. This crucial process of forming new invasion organelles relies on the membrane trafficking system. If this process is disrupted in any way, the invasion organelles are not formed, and the parasite cannot invade new host cells. Without the ability to hide in host cells, the parasite succumbs quickly to host immune responses or starvation. Despite the importance of membrane trafficking for parasite survival, a full picture of this system is still emerging. Using advanced computational methods, I will identify trafficking machinery encoded in the genomes of these parasites. Working with international collaborators, I will further characterize these genes using transcriptomic (gene expression) and cell biological (gene function) approaches to determine which genes are involved in this critical trafficking process. This project will significantly enhance understanding of an essential process in a group of deadly parasites important both globally, and here in Canada.
Competitiondate
201511
Approvedterm2
3 yrs 0 mth
Pinamesdelim
Klinger, Christen M
Approvedterm
3 ans 0 mois
Cihrcontribution2
~ $150,000~ $0~