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Grant: Project Grant

University of Toronto

$1,143,675.00

PEXIL- A Novel Massively Parallel Drug Screening Technology to Identify Compounds to Combat Multiple Human Pathogens

FY 2022-23

Summary
The world desperately needs new medicines to treat evasive human pathogens. Each year, 1.5 million (M) people die from tuberculosis, 1M die from mosquito-borne diseases, 0.2M die from blood flukes, 1M lose their vision from river blindness, and hospitals are increasingly riddled with drug-resistant bacterial and fungal infections. These diseases still kill people because of a lack of effective drugs. Here, we present a novel, fast, and efficient technology that enables the discovery of new candidate drugs to target these diseases. Our previous work revealed a group of small molecules that kill worm parasites in a novel way. These molecules only become lethal when they are converted into lethal products by an enzyme called cytochrome p450 (CYP). Importantly, when we express the worm CYPs in baker's yeast, our new molecules can kill the yeast in a worm CYP-dependent way. These results led us to the idea that we can express CYPs from many different pathogens in yeast and then screen for molecules that kill specific yeast strains in a CYP-dependent manner. Here, we describe how we will use our new technology to identify new candidate drugs. We will build a library of yeast strains in which each strain expresses a distinct CYP from humans, drug-resistant and difficult-to-treat bacteria, fungi, parasites or mosquitos. We pool these strains together and screen the entire pool at once against 1000s of candidate new drugs. DNA sequencing technology is used to identify which yeast strain within the pool dies in response to which candidate drug. Molecules that kill yeast strains expressing pathogenic (but not human) CYPs are further prioritized with tests against the pathogens themselves. Our new drug discovery technology has immense power by targeting 25 of the world's most dangerous human pathogens in parallel. It will yield new drug leads and new drug targets, all of which will contribute to the development of new medicines to treat evasive human pathogens.
Program
Project Grant
Location
Ontario, Canada
Recipient Type
Academia
Type
Grant
Source
CIHR Funding Decisions Database

As published

Id
468542
Name
Roy Peter J
Region
Ontario
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Genetics
Theme2
Biomedical
Prcname2
Genomics: Systems and computational biology
Projecttitle
PEXIL- A Novel Massively Parallel Drug Screening Technology to Identify Compounds to Combat Multiple Human Pathogens
Programtype2
Operating Grants
Orgnameinp2
University of Toronto
Cihramount2
$1,143,675
Cihrequipment2
$0
Programname2
Project Grant
Keyworddelim
Cell Based Drug Screens; Cytochrome P450s; Dna Barcodes; Drug-Resistant Pathogens And Parasites; Functional Genomics; High-Throughput Assay; Infectious Disease; Next-Generation Sequencing; Pre-Clinical Drug Discovery; Prodrugs
Abstract
The world desperately needs new medicines to treat evasive human pathogens. Each year, 1.5 million (M) people die from tuberculosis, 1M die from mosquito-borne diseases, 0.2M die from blood flukes, 1M lose their vision from river blindness, and hospitals are increasingly riddled with drug-resistant bacterial and fungal infections. These diseases still kill people because of a lack of effective drugs. Here, we present a novel, fast, and efficient technology that enables the discovery of new candidate drugs to target these diseases. Our previous work revealed a group of small molecules that kill worm parasites in a novel way. These molecules only become lethal when they are converted into lethal products by an enzyme called cytochrome p450 (CYP). Importantly, when we express the worm CYPs in baker's yeast, our new molecules can kill the yeast in a worm CYP-dependent way. These results led us to the idea that we can express CYPs from many different pathogens in yeast and then screen for molecules that kill specific yeast strains in a CYP-dependent manner. Here, we describe how we will use our new technology to identify new candidate drugs. We will build a library of yeast strains in which each strain expresses a distinct CYP from humans, drug-resistant and difficult-to-treat bacteria, fungi, parasites or mosquitos. We pool these strains together and screen the entire pool at once against 1000s of candidate new drugs. DNA sequencing technology is used to identify which yeast strain within the pool dies in response to which candidate drug. Molecules that kill yeast strains expressing pathogenic (but not human) CYPs are further prioritized with tests against the pathogens themselves. Our new drug discovery technology has immense power by targeting 25 of the world's most dangerous human pathogens in parallel. It will yield new drug leads and new drug targets, all of which will contribute to the development of new medicines to treat evasive human pathogens.
Competitiondate
202209
Approvedterm2
5 yrs 0 mth
Pinamesdelim
Roy, Peter J
Approvedterm
5 ans 0 mois
Cihrcontribution2
~ $1,143,675~ $0~