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Grant: Engage Grants Program

University of Guelph

$24,999.00

Solving the mystery of ""Syrah decline"" in Canadian vineyards through next generation sequencing and PCR

FY 2014-15

Summary
Grape is the most widely grown fruit crop in the world. Ontario is the major producer of grapes and wines inCanada. The grape and wine industry serves as a corner stone for Ontario's economy. Unfortunately, grapes areseverely afflicted by infectious diseases. Viruses constitute a group of highly damaging pathogens of grapesand are responsible for considerable losses due to reduced yield and quality of grape and wine products, as wellas shortened lifespan of vineyards. Located in Jordan Station in the Niagara Peninsular, Creekside EstateWinery is a medium-sized company, producing only VQA wines made purely from grapes produced inOntario. Creekside Winery is the pioneer in experimenting premium Syrah wines, including the award winningbrand name of ""Broken Press"". The unique microclimate in the Niagara Peninsular allows the production ofpremium quality Syrah grapes and wines. Unfortunately, Syrah vines growing in the Creekside estate vineyardsand those of many grape growers are severely afflicted by diseases believed to be caused by viruses. Viralinfections severely affected the productivity of Syrah vineyards as a result of reduced yield and quality ofgrapes and the wine products. Moreover, the diseased vines easily succumb to damage caused by freezingtemperatures during the harsh winters. In this collaborative project, we will employ the powerful, cutting edgetechnology, next generation sequencing (also known as deep sequencing), to discover all viruses that arepresent in these diseased Syrah vines. Subsequently, we will use reverse transcription-polymerase chainreaction (RT-PCR), cloning and DNA sequencing to determine the genetic diversity of major viruses that willbe identified through deep sequencing. This in turn will shed lights on the types viruses and viral strains thatare associated with Syrah decline. We will then establish RT-PCR based methodologies for the validation ofthese identified viruses in the Syrah grapes. Such methodologies will also be highly useful in large-scalesurveys to be conducted in the future for the purpose of resolving the etiology of Syrah decline. With the highlyeffective RNA isolation technology we recently developed in a prior Engage project, we deem the objectives of
Program
Engage Grants Program
Location
Ontario, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data

As published

Application id
469921-2014
Name nom
Meng, Baozhong
Department département
Molecular and Cellular Biology
Organization id
24
Institution établissement
University of Guelph
Province en
Ontario
Province fr
Ontario
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2014
Competition year année de concours
2014
Award amount
24999
Program id
EGP
Program name en
Engage Grants Program
Program name fr
Programme de subventions d'engagement partenariat
Group en
Research partnerships programs
Group fr
Programmes de partenariat
Committee code
1553
Committee name en
Ontario Internal Decision Committee
Committee name fr
Comité de décision interne pour l'Ontario
Area of application code
104
Area of application group en
Agriculture and primary food production
Area of application group fr
Agriculture et produits alimentaires primaires
Area of application en
Crop management (pest,disease control and breeding)
Area of application fr
Gestion des cultures (lutte contre les organismes nuisibles et reproduction)
Research subject code
5202
Research subject group en
Microbiology
Research subject group fr
Microbiologie
Research subject en
Virology
Research subject fr
Virologie
Partie
1
Nb partie
1
Application title
Solving the mystery of ""Syrah decline"" in Canadian vineyards through next generation sequencing and PCR
Keyword
NSERC
Application summary
Grape is the most widely grown fruit crop in the world. Ontario is the major producer of grapes and wines inCanada. The grape and wine industry serves as a corner stone for Ontario's economy. Unfortunately, grapes areseverely afflicted by infectious diseases. Viruses constitute a group of highly damaging pathogens of grapesand are responsible for considerable losses due to reduced yield and quality of grape and wine products, as wellas shortened lifespan of vineyards. Located in Jordan Station in the Niagara Peninsular, Creekside EstateWinery is a medium-sized company, producing only VQA wines made purely from grapes produced inOntario. Creekside Winery is the pioneer in experimenting premium Syrah wines, including the award winningbrand name of ""Broken Press"". The unique microclimate in the Niagara Peninsular allows the production ofpremium quality Syrah grapes and wines. Unfortunately, Syrah vines growing in the Creekside estate vineyardsand those of many grape growers are severely afflicted by diseases believed to be caused by viruses. Viralinfections severely affected the productivity of Syrah vineyards as a result of reduced yield and quality ofgrapes and the wine products. Moreover, the diseased vines easily succumb to damage caused by freezingtemperatures during the harsh winters. In this collaborative project, we will employ the powerful, cutting edgetechnology, next generation sequencing (also known as deep sequencing), to discover all viruses that arepresent in these diseased Syrah vines. Subsequently, we will use reverse transcription-polymerase chainreaction (RT-PCR), cloning and DNA sequencing to determine the genetic diversity of major viruses that willbe identified through deep sequencing. This in turn will shed lights on the types viruses and viral strains thatare associated with Syrah decline. We will then establish RT-PCR based methodologies for the validation ofthese identified viruses in the Syrah grapes. Such methodologies will also be highly useful in large-scalesurveys to be conducted in the future for the purpose of resolving the etiology of Syrah decline. With the highlyeffective RNA isolation technology we recently developed in a prior Engage project, we deem the objectives of