Grant: Operating Grant
University of Toronto
$1,360,048.00
Large-scale analysis of complex genetic suppression networks
FY 2012-13
Summary
Scientists now know that the ability of cells to grow and divide is governed by thousands of genes and that the function of genes is remarkably conserved from simple yeasts to human cells. Our group has pioneered methods that take advantage of the experimental accessibility of the yeast model system to understand how genes work together to create healthy cells or to produce a disease state. We have developed a unique robotics lab called GenNet that allows us to automate yeast genetic screens. We have used GenNet to produce the first maps of genetic interactions, providing a view of the 'wiring diagram' of a cell. We now propose to expand our GenNet platform to allow us to explore genetic interactions that are often associated with human diseases. We are particularly interested in understanding a phenomenon called genetic suppression in which lesions in one gene compensate for the deleterious effects of mutations in another. Suppression provides a powerful tool for identifying new relationships between genes and their corresponding pathways in the cell. Moreover, suppressors of mutations associated with a human disease gene represent potential targets for therapeutic intervention. So far, there have been no methods developed for systematic analysis of genetic suppression, and we aim to produce the first complete 'network' of genetic suppression for any organism. We expect that our diagram will be an invaluable tool for predicting genetic interactions relevant to many complex human diseases.
Department
Program
Operating Grant
Recipient
Location
Ontario, Canada
Recipient Type
Academia
Type
Grant
Source
CIHR Funding Decisions Database
As published
Id
281086
Name
Boone Charles M
Region
Ontario
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Genetics
Theme2
Biomedical
Prcname2
Genomics: Systems and computational biology
Projecttitle
Large-scale analysis of complex genetic suppression networks
Programtype2
Operating Grants
Orgnameinp2
University of Toronto
Cihramount2
$1,360,048
Cihrequipment2
$0
Programname2
Operating Grant
Keyworddelim
Complex Genetic Disease; Complex Traits; Functional Genomics; Genetic Interactions; Suppression; Yeast Genetics
Abstract
Scientists now know that the ability of cells to grow and divide is governed by thousands of genes and that the function of genes is remarkably conserved from simple yeasts to human cells. Our group has pioneered methods that take advantage of the experimental accessibility of the yeast model system to understand how genes work together to create healthy cells or to produce a disease state. We have developed a unique robotics lab called GenNet that allows us to automate yeast genetic screens. We have used GenNet to produce the first maps of genetic interactions, providing a view of the 'wiring diagram' of a cell. We now propose to expand our GenNet platform to allow us to explore genetic interactions that are often associated with human diseases. We are particularly interested in understanding a phenomenon called genetic suppression in which lesions in one gene compensate for the deleterious effects of mutations in another. Suppression provides a powerful tool for identifying new relationships between genes and their corresponding pathways in the cell. Moreover, suppressors of mutations associated with a human disease gene represent potential targets for therapeutic intervention. So far, there have been no methods developed for systematic analysis of genetic suppression, and we aim to produce the first complete 'network' of genetic suppression for any organism. We expect that our diagram will be an invaluable tool for predicting genetic interactions relevant to many complex human diseases.
Competitiondate
201303
Approvedterm2
5 yrs 0 mth
Pinamesdelim
Boone, Charles M
Approvedterm
5 ans 0 mois
Cihrcontribution2
~ $1,360,048~ $0~