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Grant: Travel Awards - Institute Community Support

Queen's University (Kingston, Ontario)

$1,350.00

Clinical Impact of Oncomine Myeloid Targeted DNA Sequencing Assay for Patients with Hematological Disorders

FY 2018-19

Summary
In recent years, the significance of genetic information in the diagnosis, screening, and treatment of myeloid (blood) cancers has become highly evident. The increasing impact of identifying genes associated with these cancers necessitates more comprehensive screening techniques. Targeted next-generation sequencing (NGS) is a tool that permits the identification of many genes in one efficient test that can be applied for patients using blood or bone marrow. NGS works by assessing a patient's DNA (obtained from these blood or bone marrow samples) to determine whether there are any variations in the sequence (mutations) that may be contributing to their disease. Targeted NGS refers specifically to the assessment of a group of genes known to play a role in blood cancers. NGS allows the simultaneous assessment of many genes in a single, efficient, comprehensive test. The results of this test (showing whether there is variation in a patients' DNA) can inform clinicians about this patients' disease based on current research surrounding affected genes. This tool will not only complement current techniques but may in fact replace them. We performed sequencing of DNA from patient samples using the Thermo Fisher Ion Chef and Ion S5 sequencer. We analyzed the sequencing results and classified variants (changes in genes/DNA) into 1 of 3 tiers to determine their potential impact on patient care. To date, we have performed sequencing of 101 samples from 94 unique patients with a variety of myeloid cancers. Of the variants (abnormalities) detected, 63% were potentially actionable (impacted patient care). In the majority of patients, we were able to identify variants that may aid clinicians in achieving/clarifying diagnoses, inform follow-up/prognosis, and guide treatment decisions. Our findings highlight the importance of integrating NGS into clinical testing for patients with myeloid cancers.
Program
Travel Awards - Institute Community Support
Location
Ontario, Canada
Type
Grant
Source
CIHR Funding Decisions Database

As published

Id
400222
Name
Ferrone Christina
Region
Ontario
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Cancer Research
Theme2
Biomedical
Prcname2
Institute of Cancer Research
Projecttitle
Clinical Impact of Oncomine Myeloid Targeted DNA Sequencing Assay for Patients with Hematological Disorders
Programtype2
Undefined
Orgnameinp2
Queen's University (Kingston, Ontario)
Cihramount2
$1,350
Cihrequipment2
$0
Programname2
Travel Awards - Institute Community Support
Keyworddelim
Myeloid Cancers
Abstract
In recent years, the significance of genetic information in the diagnosis, screening, and treatment of myeloid (blood) cancers has become highly evident. The increasing impact of identifying genes associated with these cancers necessitates more comprehensive screening techniques. Targeted next-generation sequencing (NGS) is a tool that permits the identification of many genes in one efficient test that can be applied for patients using blood or bone marrow. NGS works by assessing a patient's DNA (obtained from these blood or bone marrow samples) to determine whether there are any variations in the sequence (mutations) that may be contributing to their disease. Targeted NGS refers specifically to the assessment of a group of genes known to play a role in blood cancers. NGS allows the simultaneous assessment of many genes in a single, efficient, comprehensive test. The results of this test (showing whether there is variation in a patients' DNA) can inform clinicians about this patients' disease based on current research surrounding affected genes. This tool will not only complement current techniques but may in fact replace them. We performed sequencing of DNA from patient samples using the Thermo Fisher Ion Chef and Ion S5 sequencer. We analyzed the sequencing results and classified variants (changes in genes/DNA) into 1 of 3 tiers to determine their potential impact on patient care. To date, we have performed sequencing of 101 samples from 94 unique patients with a variety of myeloid cancers. Of the variants (abnormalities) detected, 63% were potentially actionable (impacted patient care). In the majority of patients, we were able to identify variants that may aid clinicians in achieving/clarifying diagnoses, inform follow-up/prognosis, and guide treatment decisions. Our findings highlight the importance of integrating NGS into clinical testing for patients with myeloid cancers.
Competitiondate
201901
Approvedterm2
1 yr 0 mth
Pinamesdelim
Ferrone, Christina
Approvedterm
1 an 0 mois
Cihrcontribution2
Inst of Cancer Research~ $1,350~ $0~
Queen's University (Kingston, Ontario) - $1,350 Grant… | Canada Spends