Grant: Project Grant
University of Toronto
$561,909.00
Predicting the impact of mutations in intrinsically disordered regions
FY 2015-16
Summary
Current "personalized medicine" projects are identifying all the mutations in every patient, and we need to know which of those mutations are likely to cause diseases. About 1/5 of known disease mutations occur in enigmatic protein regions known as intrinsically disordered regions. When we discover new mutations in disordered regions, we currently can't tell which are harmful (drivers of disease) and which ones are benign (bystanders).
Evolutionary analysis can point to biological function because functional sequences are preferentially preserved during evolution. If mutations in disordered regions disrupt features of disordered regions that have been preserved over evolutionary time, we predict that these are more likely to affect function and cause disease. Based on this principle, we propose to develop new bioinformatics to better predict the impact of mutations in disordered regions. To understand why disrupting the conserved features is harmful, we will test the impact of engineered mutations in yeast cells, because they are simpler and easier to study than human cells.
In the end, we hope to develop better methods to predict the impact of mutations in disordered regions, and also understand why the mutations in these regions lead to disease.
Department
Program
Project Grant
Recipient
Location
Ontario, Canada
Recipient Type
Academia
Type
Grant
Source
CIHR Funding Decisions Database
As published
Id
344189
Name
Moses Alan M
Region
Ontario
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Genetics
Theme2
Biomedical
Prcname2
Project Grant Competition
Projecttitle
Predicting the impact of mutations in intrinsically disordered regions
Programtype2
Operating Grants
Orgnameinp2
University of Toronto
Cihramount2
$561,909
Cihrequipment2
$0
Programname2
Project Grant
Keyworddelim
Bioinformatics; Disease Mutations; Evolutionary Proteomics; Intrinsically Disordered Regions
Abstract
Current "personalized medicine" projects are identifying all the mutations in every patient, and we need to know which of those mutations are likely to cause diseases. About 1/5 of known disease mutations occur in enigmatic protein regions known as intrinsically disordered regions. When we discover new mutations in disordered regions, we currently can't tell which are harmful (drivers of disease) and which ones are benign (bystanders).
Evolutionary analysis can point to biological function because functional sequences are preferentially preserved during evolution. If mutations in disordered regions disrupt features of disordered regions that have been preserved over evolutionary time, we predict that these are more likely to affect function and cause disease. Based on this principle, we propose to develop new bioinformatics to better predict the impact of mutations in disordered regions. To understand why disrupting the conserved features is harmful, we will test the impact of engineered mutations in yeast cells, because they are simpler and easier to study than human cells.
In the end, we hope to develop better methods to predict the impact of mutations in disordered regions, and also understand why the mutations in these regions lead to disease.
Competitiondate
201603
Approvedterm2
5 yrs 0 mth
Pinamesdelim
Moses, Alan M
Approvedterm
5 ans 0 mois
Cihrcontribution2
~ $561,909~ $0~