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Grant: Doctoral Research Award - Hypertension Prevention

Centre hospitalier de l'Université de Montréal (CHUM)

$19,000.00

Copy number variants analysis in hypertension and its associated metabolic components

FY 2008-09

Summary
Hypertension is a disease with increasing frequency in western as well as in transition-economy countries. As many genetic and environmental factors participate and interact in the development of hypertension, the identification of genes involved in altered blood pressure regulation is rather complicated. New genome-wide scanning methodologies enable the detection of larger-sized variability in genomes such as Copy Number Variant (CNV) which represents change (gain or loss) in copy number of DNA fragments of at least 1 KB compared to the reference genome, often resulting in an increase or decrease of the gene product. Although DNA copy number variation phenomenon has been known for a long time, it has only recently been reported to be widely present in the human genome, potentially accounting for important source of variation in genomic components of complex traits like blood pressure. Some CNVs have already been shown to be involved in disease such as Parkinson, Alzheimer, autism or HIV-1 infection susceptibility. The present study aims to investigate, using Affymetrix DNA Mapping arrays, genome-wide characteristics of CNVs in unique set of 75 French-Canadian families (from Saguenay-Lac St-Jean region of Quebec) affected by hypertension. In combination with available data on hundreds of rigorously acquired blood pressure, body composition and metabolic traits and complete annotation of the ancestry back to 17th century, we plan to identify CNVs linked to or associated with hypertension and related metabolic abnormalities and conferring risk for or protection from this disease. Hence, this project will contribute to elucidate the role of CNVs as hereditary component of hypertension, and, for the first time, to analyze in depth their familial transmission in uniquely disposed cohorts. The identification of pathogenic CNVs will help to elaborate tools for early diagnosis and targeted prevention strategies.
Program
Doctoral Research Award - Hypertension Prevention
Location
Quebec, Canada
Recipient Type
Not-for-profit organization or charity
Type
Grant
Source
CIHR Funding Decisions Database

As published

Id
174634
Name
Ivanga Mahine
Region
Québec
Country
Canada
Orgtype
Institution Paid; Research Institution
Partnername
Pfizer Canada Inc. (Quebec); Hypertension Canada (Markham, Ontario)
Instname2
Genetics
Theme2
Social / Cultural / Environmental / Population Health
Prcname2
Doctoral Research Awards - A
Projecttitle
Copy number variants analysis in hypertension and its associated metabolic components
Programtype2
Studentship Programs
Orgnameinp2
Centre hospitalier de l'Université de Montréal (CHUM)
Cihramount2
$19,000
Cihrequipment2
$0
Programname2
Doctoral Research Award - Hypertension Prevention
Keyworddelim
Bioinformatics; Complex Traits; Copy Number Variation; Epidemiology Genetics; Genotyping Arrays; High Blood Pressure; Human Genomics; Metabolic Syndrome; Molecular Biology; Polymorphisms
Abstract
Hypertension is a disease with increasing frequency in western as well as in transition-economy countries. As many genetic and environmental factors participate and interact in the development of hypertension, the identification of genes involved in altered blood pressure regulation is rather complicated. New genome-wide scanning methodologies enable the detection of larger-sized variability in genomes such as Copy Number Variant (CNV) which represents change (gain or loss) in copy number of DNA fragments of at least 1 KB compared to the reference genome, often resulting in an increase or decrease of the gene product. Although DNA copy number variation phenomenon has been known for a long time, it has only recently been reported to be widely present in the human genome, potentially accounting for important source of variation in genomic components of complex traits like blood pressure. Some CNVs have already been shown to be involved in disease such as Parkinson, Alzheimer, autism or HIV-1 infection susceptibility. The present study aims to investigate, using Affymetrix DNA Mapping arrays, genome-wide characteristics of CNVs in unique set of 75 French-Canadian families (from Saguenay-Lac St-Jean region of Quebec) affected by hypertension. In combination with available data on hundreds of rigorously acquired blood pressure, body composition and metabolic traits and complete annotation of the ancestry back to 17th century, we plan to identify CNVs linked to or associated with hypertension and related metabolic abnormalities and conferring risk for or protection from this disease. Hence, this project will contribute to elucidate the role of CNVs as hereditary component of hypertension, and, for the first time, to analyze in depth their familial transmission in uniquely disposed cohorts. The identification of pathogenic CNVs will help to elaborate tools for early diagnosis and targeted prevention strategies.
Competitiondate
200810
Approvedterm2
2 yrs 0 mth
Pinamesdelim
Ivanga, Mahine
Approvedterm
2 ans 0 mois
Cihrcontribution2
~ $19,000~ $0~
Centre hospitalier de l'Université de Montréal (CHUM)… | Canada Spends