Grant: Research Tools and Instruments
University of Calgary
$150,000.00
Probing brain network dynamics in freely behaving animals
FY 2020-21
Summary
Over the past decade, neuroscience has seen an explosion of new techniques that leverage light-based tools to visualize and manipulate brain activity. Combined with powerful genetic methods that allow for targeted expression of light-based protein actuators or light-emitting activity reporters, the field now has the ability for a formerly unthinkable level of precision and insight into the working brain in freely behaving animals. We, and others at the University of Calgary have leveraged these approaches to gain new knowledge about social behavior, defensive responses to threat or control of brain blood flow. These insights have required the parallel development of data analysis pipelines, computational tools and machine learning approaches. This is global effort, but significant inroads are being made by researchers in Calgary.
Currently, we have the capacity to either: 1) record activity of cell populations in the brain using genetically expressed calcium indicators, such as GCaMP, that allow for the observation of calcium fluctuations in genetically identified cell populations, or: 2) manipulate activity, (discrete activation or inhibition of defined cell populations) using optogenetic approaches. Neural activity is recorded using miniature microscopes that allow for real-time activity readouts in a freely behaving animal at the resolution of a single sell. Activity is manipulated using implanted optical fibres that allow for the delivery of light at specific wavelengths to activate or inhibit cells. These parallel information streams offer important information but we cannot observe and manipulate cell activity in the same experiment, which means that linking the two approaches is inferential.
Here we request funding for two nVoke miniature microscopy systems that combine simultaneous activity sampling with manipulation in a single head-mounted unit. These will upgrade existing Inscopix miniature microscopes that have imaging only capabilities. As one example, we will use this equipment to record and perturb PVNCRH activity during social and defensive behaviors and allow us to determine whether discrete projections from specific PVNCRH neurons to one brain target mediate one behavior (social approach) vs another (defensive escape). This will provide new information that begins to advance and test ideas related to functional heterogeneity in PVNCRH populations and lead to more targeted manipulations of defensive, social and stress behaviors. The upgraded equipment will be housed in the CSM Optogenetics Core Facility where it will be under the oversight of trained staff scientists. This will also allow other research groups to access this equipment for other explorations linking brain circuits and behavior.
Program
Research Tools and Instruments
Recipient
Location
Alberta, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data
As published
Application id
RTI-2021-00094
Name nom
Bains, Jaideep
Department département
Physiology & Pharmacology
Organization id
11
Institution établissement
University of Calgary
Province en
Alberta
Province fr
Alberta
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2020
Competition year année de concours
2021
Award amount
150000
Program id
RTI
Program name en
Research Tools and Instruments
Program name fr
Outils et instruments de recherche
Group en
Discovery grants programs
Group fr
Programmes de subventions à la découverte
Committee code
1602
Committee name en
Biological Systems and Functions (RTI)
Committee name fr
Systèmes et fonctions biologiques (OIR)
Area of application code
515
Area of application group en
Manufacturing processes and products
Area of application group fr
Procédés et produits industriels
Area of application en
Instrumentation technology
Area of application fr
Technologie de l'instrumentation
Research subject code
5501
Research subject group en
Animal biology
Research subject group fr
Biologie animale
Research subject en
Neurophysiology
Research subject fr
Neurophysiologie
Installment
inst:1-1
Partie
1
Nb partie
1
Application title
Probing brain network dynamics in freely behaving animals
Keyword
NSERC
Application summary
Over the past decade, neuroscience has seen an explosion of new techniques that leverage light-based tools to visualize and manipulate brain activity. Combined with powerful genetic methods that allow for targeted expression of light-based protein actuators or light-emitting activity reporters, the field now has the ability for a formerly unthinkable level of precision and insight into the working brain in freely behaving animals. We, and others at the University of Calgary have leveraged these approaches to gain new knowledge about social behavior, defensive responses to threat or control of brain blood flow. These insights have required the parallel development of data analysis pipelines, computational tools and machine learning approaches. This is global effort, but significant inroads are being made by researchers in Calgary.
Currently, we have the capacity to either: 1) record activity of cell populations in the brain using genetically expressed calcium indicators, such as GCaMP, that allow for the observation of calcium fluctuations in genetically identified cell populations, or: 2) manipulate activity, (discrete activation or inhibition of defined cell populations) using optogenetic approaches. Neural activity is recorded using miniature microscopes that allow for real-time activity readouts in a freely behaving animal at the resolution of a single sell. Activity is manipulated using implanted optical fibres that allow for the delivery of light at specific wavelengths to activate or inhibit cells. These parallel information streams offer important information but we cannot observe and manipulate cell activity in the same experiment, which means that linking the two approaches is inferential.
Here we request funding for two nVoke miniature microscopy systems that combine simultaneous activity sampling with manipulation in a single head-mounted unit. These will upgrade existing Inscopix miniature microscopes that have imaging only capabilities. As one example, we will use this equipment to record and perturb PVNCRH activity during social and defensive behaviors and allow us to determine whether discrete projections from specific PVNCRH neurons to one brain target mediate one behavior (social approach) vs another (defensive escape). This will provide new information that begins to advance and test ideas related to functional heterogeneity in PVNCRH populations and lead to more targeted manipulations of defensive, social and stress behaviors. The upgraded equipment will be housed in the CSM Optogenetics Core Facility where it will be under the oversight of trained staff scientists. This will also allow other research groups to access this equipment for other explorations linking brain circuits and behavior.