Grant: CIHR Fellowship
Direct Payment
$150,000.00
A single-cell model of gene transcription in mammalian immunity
FY 2013-14
Summary
Although all cells in the body contain an identical copy of the genome, they perform very different tasks. This is possible because different genes are turned on and off in each cell type. Each gene includes a set of instructions encoded in the DNA sequence that regulate when and where the gene should be activated. When mutations occur in these regulatory sequences, genes can turn on or off at inappropriate times, potentially resulting in disease, such as cancer or autoimmune disease. To identify and treat these diseases, we must first understand how cells read and interpret regulatory sequences. Others have tried to model this process for specific tissues, but sometimes these tissues contain several distinct types of cells, each with different genes turned on and off. We intend to leverage recent technological advances to monitor and model gene regulation in individual cells. Our approach will help us to better understand how genes are regulated and will help us to determine how mutations affecting gene regulation result in disease.
Department
Program
CIHR Fellowship
Recipient
Location
Massachusetts, United States of America
Type
Grant
Source
CIHR Funding Decisions Database
As published
Id
301088
Name
De Boer Carl G
Region
Massachusetts
Country
United States of America
Orgtype
Research Institution
Instname2
Genetics
Theme2
Biomedical
Prcname2
Fellowships - Post-PhD
Projecttitle
A single-cell model of gene transcription in mammalian immunity
Programtype2
Fellowship Programs
Orgnameinp2
Direct Payment
Cihramount2
$150,000
Cihrequipment2
$0
Programname2
CIHR Fellowship
Keyworddelim
Chip-Seq; Computer Models; Enhancer; Gene Expression; Gene Regulation; Immunology; Promoter; Rna-Seq; Transcription; Transcription Factor
Abstract
Although all cells in the body contain an identical copy of the genome, they perform very different tasks. This is possible because different genes are turned on and off in each cell type. Each gene includes a set of instructions encoded in the DNA sequence that regulate when and where the gene should be activated. When mutations occur in these regulatory sequences, genes can turn on or off at inappropriate times, potentially resulting in disease, such as cancer or autoimmune disease. To identify and treat these diseases, we must first understand how cells read and interpret regulatory sequences. Others have tried to model this process for specific tissues, but sometimes these tissues contain several distinct types of cells, each with different genes turned on and off. We intend to leverage recent technological advances to monitor and model gene regulation in individual cells. Our approach will help us to better understand how genes are regulated and will help us to determine how mutations affecting gene regulation result in disease.
Competitiondate
201311
Approvedterm2
3 yrs 0 mth
Pinamesdelim
De Boer, Carl G
Approvedterm
3 ans 0 mois
Cihrcontribution2
~ $150,000~ $0~