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Grant: Discovery Grants Program - Individual

York University

$36,000.00

Expanding the Chemistry of Nucleic Acids for the Discovery of Molecular Function

FY 2018-19

Summary
The encompassing theme within my research program is the development and application of technologies that harness the power of DNA toward the evolution and discovery of novel molecules capable of molecular recognition and catalysis. Our research centres on developing robust screening technologies that address critical needs such as new artificial antibodies for biomedical research and new catalysts for organic synthesis. To this end, my research group has established new methods that enable the generation and high-throughput screening of large DNA-encoded combinatorial libraries ranging from synthetic biopolymers capable of binding proteins to small-molecules capable of catalyzing chemical transformations. Building from these findings, this proposal will study the potential of DNA as a tool for the discovery of molecular function.*The first thrust of this program is the study of nucleic acid polymers with increased chemical diversity and their evolution for novel function. My lab has pioneered enzymatic methods to generate DNA with diverse chemical functionality. We will develop scalable synthetic methods for their generation, study the functional group influence on molecular recognition and catalysis, improve binding and catalytic properties of DNA, and demonstrate their evolution as receptors and catalysts for biomedical research. *In a second thrust we will develop DNA-encoded small-molecule catalyst libraries for high-throughput catalyst screening of bond-forming chemistries. Central to achieving this is an amphiphilic DNA developed in our lab, which enables the encoding and screening of >10 million unique molecules in as little as 20 uL of solvent. In advancing this research, we will focus on studying the limitations of our recently developed screening platform, including reaction scope and catalyst type. Furthermore, we will develop new synthetic methods for the generation of DNA-encoded small-molecule libraries, which will enable the rapid discovery of catalysts for synthesis of fine chemicals including pharmaceutically-relevant small molecules.*This interdisciplinary program on nucleic acids research relies on expertise in synthetic chemistry, polymer chemistry, biological chemistry, combinatorial science, catalysis, and molecular biology. If successful, access to improved nucleic acid-based artificial antibodies for biomedical research and therapeutics will be made possible. Furthermore, greener' high-throughput technologies for catalyst development will be available. Lastly, this research seeks to expand our fundamental understanding of the evolutionary fitness of synthetic polymers for various molecular function, including the chemical diversity and structure-activity relationships required to achieve such molecular function. This program will train 19 multidisciplinary scientists.
Program
Discovery Grants Program - Individual
Location
Ontario, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data

As published

Application id
RGPIN-2018-05865
Name nom
Hili, Ryan
Department département
Research on Biomolecular Interactions, Centre for
Organization id
38
Institution établissement
York University
Province en
Ontario
Province fr
Ontario
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2018
Competition year année de concours
2018
Award amount
36000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
Discovery grants programs
Group fr
Programmes de subventions à la découverte
Committee code
1504
Committee name en
Chemistry
Committee name fr
Chimie
Area of application code
1201
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Life sciences (including biotechnology)
Area of application fr
Sciences de la vie (y compris biotechnologie)
Research subject code
3705
Research subject group en
Organic chemistry
Research subject group fr
Chimie organique
Research subject en
Bio-organic chemistry
Research subject fr
Chimie bio-organique
Partie
1
Nb partie
5
Application title
Expanding the Chemistry of Nucleic Acids for the Discovery of Molecular Function
Keyword
NSERC
Application summary
The encompassing theme within my research program is the development and application of technologies that harness the power of DNA toward the evolution and discovery of novel molecules capable of molecular recognition and catalysis. Our research centres on developing robust screening technologies that address critical needs such as new artificial antibodies for biomedical research and new catalysts for organic synthesis. To this end, my research group has established new methods that enable the generation and high-throughput screening of large DNA-encoded combinatorial libraries ranging from synthetic biopolymers capable of binding proteins to small-molecules capable of catalyzing chemical transformations. Building from these findings, this proposal will study the potential of DNA as a tool for the discovery of molecular function.*The first thrust of this program is the study of nucleic acid polymers with increased chemical diversity and their evolution for novel function. My lab has pioneered enzymatic methods to generate DNA with diverse chemical functionality. We will develop scalable synthetic methods for their generation, study the functional group influence on molecular recognition and catalysis, improve binding and catalytic properties of DNA, and demonstrate their evolution as receptors and catalysts for biomedical research. *In a second thrust we will develop DNA-encoded small-molecule catalyst libraries for high-throughput catalyst screening of bond-forming chemistries. Central to achieving this is an amphiphilic DNA developed in our lab, which enables the encoding and screening of >10 million unique molecules in as little as 20 uL of solvent. In advancing this research, we will focus on studying the limitations of our recently developed screening platform, including reaction scope and catalyst type. Furthermore, we will develop new synthetic methods for the generation of DNA-encoded small-molecule libraries, which will enable the rapid discovery of catalysts for synthesis of fine chemicals including pharmaceutically-relevant small molecules.*This interdisciplinary program on nucleic acids research relies on expertise in synthetic chemistry, polymer chemistry, biological chemistry, combinatorial science, catalysis, and molecular biology. If successful, access to improved nucleic acid-based artificial antibodies for biomedical research and therapeutics will be made possible. Furthermore, greener' high-throughput technologies for catalyst development will be available. Lastly, this research seeks to expand our fundamental understanding of the evolutionary fitness of synthetic polymers for various molecular function, including the chemical diversity and structure-activity relationships required to achieve such molecular function. This program will train 19 multidisciplinary scientists.