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Grant: Discovery Grants Program - Individual

Vancouver Island University

$25,000.00

From single cells to complex tissues: advances in ambient ionization mass spectrometry for observing small molecules in biological samples

FY 2023-24

Summary
Metabolites are small biomolecules such as lipids, sugars, and amino acids that are involved in all biological processes. The field of metabolomics is the targeted and non-targeted profiling of metabolites in biological samples. Profiling an organism's dynamic metabolome can help understand fundamental biological processes, and provide objective diagnosis of diseases. However, the structural diversity of metabolites in biology is vast, and includes non-polar species such as cholesterols and signalling lipids, and highly polar molecules like amino acids. To complicate matters further, the natural abundance of metabolites found in organisms can range by several orders of magnitude. Traditional analytical approaches for measuring metabolites in tissues typically requires homogenization of samples and extraction metabolites before analysis by mass spectrometry. As a result, the spatial information detailing metabolite localization to specific cellular regions in heterogeneous tissues is lost. In order to make further advances in the field, there is an urgent need for new analytical techniques to map complex mixtures of biomolecules in a wide array of samples. Through the course of this research, my group will create and engineer new ambient ionization mass spectrometry tools to profile dynamic organismal metabolomes. These tools will be developed and validated using model biological systems spanning from single mammalian cells to complex heterogeneous tissues. In the short term, we will build a new platform to comprehensively map the distribution of metabolites in tissue using mass spectrometry imaging, combine an integrate technologies for mapping metabolites and proteins in a single sample, and measure the metabolite profiles in living single cells. Used synergistically, these new techniques form an innovative analytical pipeline to profile metabolites from a diverse set of biological samples. Future applications of this novel pipeline will aid in elucidating the role of metabolites in fundamental biological pathways, or impacted metabolic pathways from exposure to chemical toxicants. Further, this Discovery Grant will develop new technology to study the relationship between individual single-cell metabolism to the metabolism of cells in tissue. This important information will provide a new perspective to help understand how cells behave in isolated conditions versus their native tissue environments. Ultimately, the technology developed in my research program will leverage transformative approaches to reveal the spatial distribution of metabolites in complex biological samples, and link observed metabolites to spatially defined protein abundances and known functions.
Program
Discovery Grants Program - Individual
Location
British Columbia, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data

As published

Application id
RGPIN-2022-03696
Name nom
Duncan, Kyle
Department département
Department of Chemsitry
Organization id
28035
Institution établissement
Vancouver Island University
Province en
British Columbia
Province fr
Colombie-Britannique
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2023
Competition year année de concours
2022
Award amount
25000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1504
Committee name en
Chemistry
Committee name fr
Chimie
Area of application code
515
Area of application group en
Manufacturing processes and products
Area of application group fr
Procédés et produits industriels
Area of application en
Instrumentation technology
Area of application fr
Technologie de l'instrumentation
Research subject code
3504
Research subject group en
Analytical chemistry
Research subject group fr
Bioanalytical chemistry
Research subject en
Chimie analytique
Research subject fr
Chimie bioanalytique
Application title
From single cells to complex tissues: advances in ambient ionization mass spectrometry for observing small molecules in biological samples
Keyword
ambient ionization; bioanalytical chemistry; desorption electrospray ionization; lipidomics; mass spectrometry; mass spectrometry imaging; metabolomics; non-targeted analysis; single-cell drug uptake; single-cell metabolomics
Application summary
Metabolites are small biomolecules such as lipids, sugars, and amino acids that are involved in all biological processes. The field of metabolomics is the targeted and non-targeted profiling of metabolites in biological samples. Profiling an organism's dynamic metabolome can help understand fundamental biological processes, and provide objective diagnosis of diseases. However, the structural diversity of metabolites in biology is vast, and includes non-polar species such as cholesterols and signalling lipids, and highly polar molecules like amino acids. To complicate matters further, the natural abundance of metabolites found in organisms can range by several orders of magnitude. Traditional analytical approaches for measuring metabolites in tissues typically requires homogenization of samples and extraction metabolites before analysis by mass spectrometry. As a result, the spatial information detailing metabolite localization to specific cellular regions in heterogeneous tissues is lost. In order to make further advances in the field, there is an urgent need for new analytical techniques to map complex mixtures of biomolecules in a wide array of samples. Through the course of this research, my group will create and engineer new ambient ionization mass spectrometry tools to profile dynamic organismal metabolomes. These tools will be developed and validated using model biological systems spanning from single mammalian cells to complex heterogeneous tissues. In the short term, we will build a new platform to comprehensively map the distribution of metabolites in tissue using mass spectrometry imaging, combine an integrate technologies for mapping metabolites and proteins in a single sample, and measure the metabolite profiles in living single cells. Used synergistically, these new techniques form an innovative analytical pipeline to profile metabolites from a diverse set of biological samples. Future applications of this novel pipeline will aid in elucidating the role of metabolites in fundamental biological pathways, or impacted metabolic pathways from exposure to chemical toxicants. Further, this Discovery Grant will develop new technology to study the relationship between individual single-cell metabolism to the metabolism of cells in tissue. This important information will provide a new perspective to help understand how cells behave in isolated conditions versus their native tissue environments. Ultimately, the technology developed in my research program will leverage transformative approaches to reveal the spatial distribution of metabolites in complex biological samples, and link observed metabolites to spatially defined protein abundances and known functions.