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Grant: Research Tools and Instruments - Category 1 (<$150,000)

Mount Allison University

$43,109.00

A fast protein liquid chromatography (FPLC) system for purification and characterization of DMSP metabolic enzymes

FY 2012-13

Summary
This is a reapplication for funding to buy an ÀKTA Purifier fast protein liquid chromatography (FPLC) system that is urgently needed to replace a ~20 yr old obsolete, unsupported, and inoperable FPLC. FPLCs are an essential tool for purifying and characterizing enzymes (protein catalysts). My research program seeks to discover and characterize marine algal enzymes that produce the world's most abundant organosulfur compound, dimethylsulfoniopropionate (DMSP). DMSP is vital 1) for algal cellular protection; 2) to bacteria who prefer DMSP as a sulfur source; 3) for supplying half the sulfur for the global biogeochemical sulfur cycle; and 4) to climate regulation since DMSP-derived aerosols form clouds. I exploit 3 complementary strategies (enzyme purification, comparative genomics, bacterial functional complementation assays) to discover genes encoding DMSP metabolic enzymes.The latter two approaches identify DMSP gene candidates that we will express in bacterial hosts as recombinant enzymes which then require purification. Native algal DMSP enzymes will be purified to enable protein sequencing tools which will reveal the genes encoding DMSP enzymes. These strategies all *depend* on purified, high-quality enzymes in order to confirm and study their function. Purified DMSP enzymes will be characterized with respect to their identity, biochemical structure, regulation, and kinetic behaviour. DMSP gene identification will enable phylogenetic studies of how widespread DMSP production is in marine algae and can enable studies predicting the response of algal DMSP production to future oceanic conditions. The FPLC system will see substantial use by my group (at least 1-2 postdoctoral and 15 undergraduates over my current Discovery award) and other researchers at Mt. Allison University, providing excellent HQP training in advanced protein purification technologies and supporting gene discovery efforts.
Program
Research Tools and Instruments - Category 1 (<$150,000)
Location
New Brunswick, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data

As published

Application id
440640-2013
Name nom
Waller, Jeffrey
Department département
Chemistry & Biochemistry
Organization id
74
Institution établissement
Mount Allison University
Province en
New Brunswick
Province fr
Nouveau-Brunswick
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2012
Competition year année de concours
2013
Award amount
43109
Program id
EQPEQ
Program name en
Research Tools and Instruments - Category 1 (<$150,000)
Program name fr
Outils et instruments de recherche - catégorie 1 (<150 000$)
Group en
Discovery grants programs
Group fr
Programmes de subventions à la découverte
Committee code
1502
Committee name en
Biological Systems and Functions
Committee name fr
Systèmes et fonctions biologiques
Area of application code
103
Area of application group en
Agriculture and primary food production
Area of application group fr
Agriculture et produits alimentaires primaires
Area of application en
Plant production and plant primary products
Area of application fr
Production végétale et produits végétaux primaires
Research subject code
4901
Research subject group en
Plant and treebiology
Research subject group fr
Biologie végétale et des arbres
Research subject en
Nutrition and metabolism, photosynthesis
Research subject fr
Nutrition et métabolisme, photosynthèse
Partie
1
Nb partie
1
Application title
A fast protein liquid chromatography (FPLC) system for purification and characterization of DMSP metabolic enzymes
Keyword
NSERC
Application summary
This is a reapplication for funding to buy an ÀKTA Purifier fast protein liquid chromatography (FPLC) system that is urgently needed to replace a ~20 yr old obsolete, unsupported, and inoperable FPLC. FPLCs are an essential tool for purifying and characterizing enzymes (protein catalysts). My research program seeks to discover and characterize marine algal enzymes that produce the world's most abundant organosulfur compound, dimethylsulfoniopropionate (DMSP). DMSP is vital 1) for algal cellular protection; 2) to bacteria who prefer DMSP as a sulfur source; 3) for supplying half the sulfur for the global biogeochemical sulfur cycle; and 4) to climate regulation since DMSP-derived aerosols form clouds. I exploit 3 complementary strategies (enzyme purification, comparative genomics, bacterial functional complementation assays) to discover genes encoding DMSP metabolic enzymes.The latter two approaches identify DMSP gene candidates that we will express in bacterial hosts as recombinant enzymes which then require purification. Native algal DMSP enzymes will be purified to enable protein sequencing tools which will reveal the genes encoding DMSP enzymes. These strategies all *depend* on purified, high-quality enzymes in order to confirm and study their function. Purified DMSP enzymes will be characterized with respect to their identity, biochemical structure, regulation, and kinetic behaviour. DMSP gene identification will enable phylogenetic studies of how widespread DMSP production is in marine algae and can enable studies predicting the response of algal DMSP production to future oceanic conditions. The FPLC system will see substantial use by my group (at least 1-2 postdoctoral and 15 undergraduates over my current Discovery award) and other researchers at Mt. Allison University, providing excellent HQP training in advanced protein purification technologies and supporting gene discovery efforts.