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Grant: Discovery Grants Program - Individual

University of Alberta

$116,000.00

Elucidating the molecular mechanisms of regulation of cellular stress sensors

FY 2023-24

Summary
Responses to stress are an integral part of organism's physiology and biology. Adaptation to stressful conditions is a decisive advantage in the evolutionary struggle for existence. The endoplasmic reticulum (ER) is a centrally located intracellular organelle responsible for many housekeeping functions including the synthesis, folding of proteins and lipids, the storage and release of intracellular calcium. Disruption of ER function caused by many intrinsic or extrinsic factors culminates in ER stress, and the ER mounts a coping response [e.g., unfolded protein response (UPR)] to mitigate or eliminate the stress. The UPR pathways sense ER disturbance and involves distinct components designed to re-establish the protein synthetic machinery, including translational attenuation, transcriptional activation of genes encoding chaperones and components of the ER-associated degradation, and activation of apoptotic and autophagy pathways. There are three ER transmembrane stress sensors that comprise the UPR reaction to ER stress: PERK, ATF6, and IRE1, integral ER proteins with luminal stress sensing domains. Our research program is focused on identifying the molecular mechanisms involved in the regulation of cellular stress sensors. Long-term objectives of this research are to generate fundamental knowledge regarding molecular mechanisms of stress sensors and to provide unique training opportunity for HQP engaged in the program. Regulation of the luminal sensor domain of UPR by the ER luminal environment remains poorly understood. This research program was initiated in 2014 to address this knowledge gap. We discovered that ER resident proteins (oxidoreductase, cyclooxygenase and calsequestrin) bind to ER luminal stress sensing domain of IRE to affect its cellular signaling. However, the molecular mechanisms governing these interactions are not known. Furthermore, regulation of other ER stress sensors remains to be examined. To address these our research program has three themes focused on reconstituting the mechanistic events in vitro, using recombinant IRE1, PERK and ATF6 luminal domain, in the presence of relevant ER resident proteins; and assessing whether ER luminal environment is involved in this process. Theme 1. Determine the nature of ER luminal stress sensors Theme 2. Examine molecular regulation of PERK and ATF6 ER stress sensors Theme 3. Determine biological importance of ER stress sensors regulation This research program will yield new insights on ER stress sensors biology, the importance of molecular interaction in stress sensing, as well as advance our general understanding of ER stress coping responses. We also provide outstanding environment for training of HQP in technologies and skills desired by industry and academic job sectors. Longer-term indicators of our success will be percentages of trainees reaching senior, influential positions as academic researchers, industry leaders or government policy makers.
Program
Discovery Grants Program - Individual
Location
Alberta, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data

As published

Application id
RGPIN-2019-04908
Name nom
Michalak, Marek
Department département
Biochemistry
Organization id
9
Institution établissement
University of Alberta
Province en
Alberta
Province fr
Alberta
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2023
Competition year année de concours
2019
Award amount
116000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1501
Committee name en
Genes, Cells and Molecules
Committee name fr
Gènes, cellules et molécules
Area of application code
1201
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Life sciences (including biotechnology)
Area of application fr
Sciences de la vie (y compris biotechnologie)
Research subject code
5305
Research subject group en
Molecular biology
Research subject group fr
Protein manipulation and expression
Research subject en
Biologie moléculaire
Research subject fr
Expression et recombinaison protéiques
Application title
Elucidating the molecular mechanisms of regulation of cellular stress sensors
Keyword
calcium signaling; endoplasmic reticulum; endoplasmic reticulum resident proteins; molecular chaperones; molecular interactions; protein folding; stress coping responses; stress sensors; stress signaling; unfolded protein response
Application summary
Responses to stress are an integral part of organism's physiology and biology. Adaptation to stressful conditions is a decisive advantage in the evolutionary struggle for existence. The endoplasmic reticulum (ER) is a centrally located intracellular organelle responsible for many housekeeping functions including the synthesis, folding of proteins and lipids, the storage and release of intracellular calcium. Disruption of ER function caused by many intrinsic or extrinsic factors culminates in ER stress, and the ER mounts a coping response [e.g., unfolded protein response (UPR)] to mitigate or eliminate the stress. The UPR pathways sense ER disturbance and involves distinct components designed to re-establish the protein synthetic machinery, including translational attenuation, transcriptional activation of genes encoding chaperones and components of the ER-associated degradation, and activation of apoptotic and autophagy pathways. There are three ER transmembrane stress sensors that comprise the UPR reaction to ER stress: PERK, ATF6, and IRE1, integral ER proteins with luminal stress sensing domains. Our research program is focused on identifying the molecular mechanisms involved in the regulation of cellular stress sensors. Long-term objectives of this research are to generate fundamental knowledge regarding molecular mechanisms of stress sensors and to provide unique training opportunity for HQP engaged in the program. Regulation of the luminal sensor domain of UPR by the ER luminal environment remains poorly understood. This research program was initiated in 2014 to address this knowledge gap. We discovered that ER resident proteins (oxidoreductase, cyclooxygenase and calsequestrin) bind to ER luminal stress sensing domain of IRE to affect its cellular signaling. However, the molecular mechanisms governing these interactions are not known. Furthermore, regulation of other ER stress sensors remains to be examined. To address these our research program has three themes focused on reconstituting the mechanistic events in vitro, using recombinant IRE1, PERK and ATF6 luminal domain, in the presence of relevant ER resident proteins; and assessing whether ER luminal environment is involved in this process. Theme 1. Determine the nature of ER luminal stress sensors Theme 2. Examine molecular regulation of PERK and ATF6 ER stress sensors Theme 3. Determine biological importance of ER stress sensors regulation This research program will yield new insights on ER stress sensors biology, the importance of molecular interaction in stress sensing, as well as advance our general understanding of ER stress coping responses. We also provide outstanding environment for training of HQP in technologies and skills desired by industry and academic job sectors. Longer-term indicators of our success will be percentages of trainees reaching senior, influential positions as academic researchers, industry leaders or government policy makers.