Grant: Discovery Grants Program - Individual
University of British Columbia
$138,000.00
Protein Glycosylation: Mechanisms and Consequences
FY 2022-23
Summary
The chemical modification of proteins with a specialized sugar called O-GlcNAc is a ubiquitous process in multicellular organisms, including humans. Over a thousand intracellular proteins are reversibly O-GlcNAcylated, and the presence of this sugar influences a diverse range of biochemical processes spanning from the expression of our genetic code to cellular signaling and various forms of stress response. However, despite its prevalence, the regulation of protein O-GlcNAcylation and the mechanisms by which it impacts cellular functions remain poorly understood at a detailed molecular level. Accordingly, the overall goals of our research program are two-fold.First, we aim to determine how the enzyme called O-GlcNAc transferase (or simply OGT) selects the specific proteins that it modifies with O-GlcNAc. In addition to the catalytic domain where the chemical transfer of O-GlcNAc occurs, OGT has a long tail called a TPR domain. It is hypothesized that the TPR domain is a scaffold that recognizes (binds) certain substrate proteins, and thereby directs their modification by the adjacent catalytic domain. Thus we will use a variety of biochemical screens to search for and identify proteins that bind the TPR domain. Once identified, we will use the powerful technique of NMR spectroscopy as a "molecular microscope" to define the properties of the substrate proteins underpinning their recognition and subsequent O-GlcNAc modification by OGT.Second, we will investigate the consequences of O-GlcNAcylation on protein function. Given the diverse cellular processes associated with this modification, it is likely that the effects of O-GlcNAc are context-dependent. In some cases, the presence of O-GlcNAc appears to prevent unwanted protein aggregation, whereas in other cases, it seems to promote or disrupt interactions with partner cellular proteins or block alternative regulatory chemical modifications such as phosphorylation. Therefore, we will use techniques such as NMR spectroscopy to determine how O-GlcNAc influences the molecular structure, motions and interactions of a representative set of proteins involved in gene expression, signaling and cellular organization. The results of our studies will help explain which proteins are O-GlcNAcylated by OGT and how this modification impacts their function. This fundamental knowledge should provide the scientific community with a much needed molecular-level understanding of the roles played by O-GlcNAcylation in many normal and aberrant cellular processes. Our research will also offer excellent training and career advancement opportunities for graduate students and postdoctoral fellows in areas ranging from biophysics to cellular biology.
Program
Discovery Grants Program - Individual
Recipient
Location
British Columbia, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data
As published
Application id
RGPIN-2018-05053
Name nom
McIntosh, Lawrence
Department département
Chemistry - Chemistry
Organization id
2
Institution établissement
University of British Columbia
Province en
British Columbia
Province fr
Colombie-Britannique
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2022
Competition year année de concours
2018
Award amount
138000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1501
Committee name en
Genes, Cells and Molecules
Committee name fr
Gènes, cellules et molécules
Area of application code
1200
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Advancement of knowledge
Area of application fr
Avancement des connaissances
Research subject code
5400
Research subject group en
Biochemistry
Research subject group fr
Biochimie
Research subject en
Biochemistry
Research subject fr
Biochimie
Installment
inst:5;6
Partie
2
Nb partie
6
Application title
Protein Glycosylation: Mechanisms and Consequences
Application summary
The chemical modification of proteins with a specialized sugar called O-GlcNAc is a ubiquitous process in multicellular organisms, including humans. Over a thousand intracellular proteins are reversibly O-GlcNAcylated, and the presence of this sugar influences a diverse range of biochemical processes spanning from the expression of our genetic code to cellular signaling and various forms of stress response. However, despite its prevalence, the regulation of protein O-GlcNAcylation and the mechanisms by which it impacts cellular functions remain poorly understood at a detailed molecular level. Accordingly, the overall goals of our research program are two-fold.First, we aim to determine how the enzyme called O-GlcNAc transferase (or simply OGT) selects the specific proteins that it modifies with O-GlcNAc. In addition to the catalytic domain where the chemical transfer of O-GlcNAc occurs, OGT has a long tail called a TPR domain. It is hypothesized that the TPR domain is a scaffold that recognizes (binds) certain substrate proteins, and thereby directs their modification by the adjacent catalytic domain. Thus we will use a variety of biochemical screens to search for and identify proteins that bind the TPR domain. Once identified, we will use the powerful technique of NMR spectroscopy as a "molecular microscope" to define the properties of the substrate proteins underpinning their recognition and subsequent O-GlcNAc modification by OGT.Second, we will investigate the consequences of O-GlcNAcylation on protein function. Given the diverse cellular processes associated with this modification, it is likely that the effects of O-GlcNAc are context-dependent. In some cases, the presence of O-GlcNAc appears to prevent unwanted protein aggregation, whereas in other cases, it seems to promote or disrupt interactions with partner cellular proteins or block alternative regulatory chemical modifications such as phosphorylation. Therefore, we will use techniques such as NMR spectroscopy to determine how O-GlcNAc influences the molecular structure, motions and interactions of a representative set of proteins involved in gene expression, signaling and cellular organization. The results of our studies will help explain which proteins are O-GlcNAcylated by OGT and how this modification impacts their function. This fundamental knowledge should provide the scientific community with a much needed molecular-level understanding of the roles played by O-GlcNAcylation in many normal and aberrant cellular processes. Our research will also offer excellent training and career advancement opportunities for graduate students and postdoctoral fellows in areas ranging from biophysics to cellular biology.