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Grant: Discovery Grants Program - Individual

University of British Columbia

$196,000.00

Discovery, characterization, and application of carbohydrate-active enzymes from diverse biological niches

FY 2022-23

Summary
The enzymatic synthesis and degradation of complex carbohydrates ranks among the most important biocatalytic processes in Nature. Thus, illuminating the catalytic diversity of carbohydrate-active enzymes (CAZymes), as well as the specificity of associated carbohydrate-binding and carbohydrate-transport proteins is of crucial fundamental importance to biology. Fundamental enzyme discovery is likewise essential to the development of efficient industrial biotechnology applications, ranging from biomass processing for food, feed, fuel, and materials, to organic biocatalysis and medical uses. In this context, the central vision of my research program is to provide new insight into the function of individual enzymes and enzyme consortia from plants and environmental microorganisms (specifically ruminal bacteria, saprophytic bacteria, and saprophytic/phytopathogenic fungi). Genomes and transcriptomes will be mined using advanced molecular phylogenetic methods to identify target CAZymes, carbohydrate-binding proteins, and TonB-dependent transporters for recombinant production and detailed enzymological/biochemical characterization, as well as structural biology and reverse-genetic analysis via well-established collaborations. Unique in Canada in terms of its breadth and systems-based approach, this program will advance the fields of carbohydrate enzymology and glycobiology through three primary Objectives: (1) Elucidating the functional evolution of GH16 beta-glucan hydrolases and transglycosylases in plant cell wall biology, (2) Systems analysis of complex polysaccharide utilization loci from environmental bacteria (3) Discovery of novel copper-radical oxidases for (bio)materials functionalization. The focus of this program will be the production of high-impact, fundamental research output, although there is significant potential for the generation of intellectual property leading to the transfer of novel enzyme and microbial technologies to industry. Through multidisciplinary cross-training, including technical, communication, teamworking, and mentorship skills, the program will stage HQP to enter leading roles in Canada's high-tech forestry, agricultural, enzyme technology, and a range of other biotechnology industries.
Program
Discovery Grants Program - Individual
Location
British Columbia, Canada
Recipient Type
Academia
Type
Grant
Source
NSERC's Awards Data

As published

Application id
RGPIN-2018-03892
Name nom
Brumer, Harry
Department département
Michael Smith Laboratories - Michael Smith Laboratories
Organization id
2
Institution établissement
University of British Columbia
Province en
British Columbia
Province fr
Colombie-Britannique
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2022
Competition year année de concours
2018
Award amount
196000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1501
Committee name en
Genes, Cells and Molecules
Committee name fr
Gènes, cellules et molécules
Area of application code
1201
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Life sciences (including biotechnology)
Area of application fr
Sciences de la vie (y compris biotechnologie)
Research subject code
5400
Research subject group en
Biochemistry
Research subject group fr
Biochimie
Research subject en
Biochemistry
Research subject fr
Biochimie
Installment
inst:5;6
Partie
2
Nb partie
6
Application title
Discovery, characterization, and application of carbohydrate-active enzymes from diverse biological niches
Application summary
The enzymatic synthesis and degradation of complex carbohydrates ranks among the most important biocatalytic processes in Nature. Thus, illuminating the catalytic diversity of carbohydrate-active enzymes (CAZymes), as well as the specificity of associated carbohydrate-binding and carbohydrate-transport proteins is of crucial fundamental importance to biology. Fundamental enzyme discovery is likewise essential to the development of efficient industrial biotechnology applications, ranging from biomass processing for food, feed, fuel, and materials, to organic biocatalysis and medical uses. In this context, the central vision of my research program is to provide new insight into the function of individual enzymes and enzyme consortia from plants and environmental microorganisms (specifically ruminal bacteria, saprophytic bacteria, and saprophytic/phytopathogenic fungi). Genomes and transcriptomes will be mined using advanced molecular phylogenetic methods to identify target CAZymes, carbohydrate-binding proteins, and TonB-dependent transporters for recombinant production and detailed enzymological/biochemical characterization, as well as structural biology and reverse-genetic analysis via well-established collaborations. Unique in Canada in terms of its breadth and systems-based approach, this program will advance the fields of carbohydrate enzymology and glycobiology through three primary Objectives: (1) Elucidating the functional evolution of GH16 beta-glucan hydrolases and transglycosylases in plant cell wall biology, (2) Systems analysis of complex polysaccharide utilization loci from environmental bacteria (3) Discovery of novel copper-radical oxidases for (bio)materials functionalization. The focus of this program will be the production of high-impact, fundamental research output, although there is significant potential for the generation of intellectual property leading to the transfer of novel enzyme and microbial technologies to industry. Through multidisciplinary cross-training, including technical, communication, teamworking, and mentorship skills, the program will stage HQP to enter leading roles in Canada's high-tech forestry, agricultural, enzyme technology, and a range of other biotechnology industries.