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Grant: Project Grant

University of Toronto

$1,074,825.00

Intrinsically disordered regions in disease: from sequence to molecular properties to function

EF 2021-22

Résumé
Rapid advances in genomic technologies have led to discoveries of important genes for many diseases. For example, there are now 100s of genes known to be involved in autism, but for the vast majority of them, we don't understand why mutations in them lead to autism, so we can't design medicines to reverse the problem. We do know that these genes encode proteins, and many of the proteins include floppy parts (referred to as intrinsically disordered regions or IDRs) that don't follow the expected patterns of protein function and evolution. A major breakthrough in the past few years was to realize that the IDRs have molecular properties such as electric charge, solubility in water, repeated amino acids, etc. These molecular properties can be discerned from the amino acid sequences, and we want to test whether these properties determine function by systematically searching for all the important properties, and then making synthetic proteins that have those properties and see if they can carry out normal protein function. We will have to do this for some example intrinsically disordered regions whose functions we do understand. At the same time, we will start to predict the function of disease genes based on these molecular properties, and interpret the effects of disease mutations. This help us understand what is going wrong when these proteins are mutated in disease.
Programme
Project Grant
Bénéficiaire
Emplacement
Ontario, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
CIHR Funding Decisions Database

Tel que publié

Id
451567
Name
Moses Alan M
Region
Ontario
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Genetics
Theme2
Biomedical
Prcname2
Genomics: Systems and computational biology
Projecttitle
Intrinsically disordered regions in disease: from sequence to molecular properties to function
Programtype2
Operating Grants
Orgnameinp2
University of Toronto
Cihramount2
$1,074,825
Cihrequipment2
$0
Programname2
Project Grant
Keyworddelim
Bioinformatics; Computational Biology; Disease Mechanisms; Intrinsically Disordered Regions; Proteins; Sequence Analysis
Abstract
Rapid advances in genomic technologies have led to discoveries of important genes for many diseases. For example, there are now 100s of genes known to be involved in autism, but for the vast majority of them, we don't understand why mutations in them lead to autism, so we can't design medicines to reverse the problem. We do know that these genes encode proteins, and many of the proteins include floppy parts (referred to as intrinsically disordered regions or IDRs) that don't follow the expected patterns of protein function and evolution. A major breakthrough in the past few years was to realize that the IDRs have molecular properties such as electric charge, solubility in water, repeated amino acids, etc. These molecular properties can be discerned from the amino acid sequences, and we want to test whether these properties determine function by systematically searching for all the important properties, and then making synthetic proteins that have those properties and see if they can carry out normal protein function. We will have to do this for some example intrinsically disordered regions whose functions we do understand. At the same time, we will start to predict the function of disease genes based on these molecular properties, and interpret the effects of disease mutations. This help us understand what is going wrong when these proteins are mutated in disease.
Competitiondate
202109
Approvedterm2
5 yrs 0 mth
Pinamesdelim
Moses, Alan M
Approvedterm
5 ans 0 mois
Cihrcontribution2
~ $1,074,825~ $0~
University of Toronto - $1,074,825 Grant (2021-22) | Canada Spends