Grant: Discovery Grants Program - Individual
Université du Québec à Rimouski
$33,000.00
The impact of human activities on genome stability
EF 2023-24
Résumé
Across the tree of life, genome content and organization are highly diverse. Deciphering the molecular mechanisms that drive this diversity is critical in the current context of global environmental change. Indeed, human activities affect natural ecological niches. However, understanding the impact of these disturbances on genome stability and consequently on evolution and adaptation is fundamental if we are to anticipate their consequences on biodiversity. An increased rate of alterations in the genome, known as genomic instability (GIN), leads to a higher frequency of mutations, chromosomal variations, and polyploidy. Although excessive GIN can be deleterious, moderate GIN may have several advantages. Increasing genetic variability in a population of cells could facilitate adaptation to stressful environments. However, the factors influencing the emergence of GIN and to which extent it may impact adaptation and speciation processes are still poorly understood. The classical evolutionary theory states that the mutation rate of an organism is independent of the environmental conditions. However, an increased mutation rate has been observed in bacteria when exposed to antibiotics. This suggests that environmental changes can influence not only natural selection, but also the amount and type of mutations available for selection. Despite advances in studies on the impact of environmental changes on different animal and plant species, how human activities affect genome stability and, consequently the adaptive potential of species remains underexplored. Our research program aims to use multidisciplinary approaches to investigate the impact of environmental stress caused by human activities on genome stability and its consequences on the adaptive potential using yeast as a model. First, we will determine the impact of the proximity to urban areas and industries on genetic and phenotypic diversity as well as on genome stability of natural yeast populations. We will assess whether yeast strains isolated in urban areas have a higher GIN than those from rural areas. Secondly, we will evaluate the impact of the presence of pollutants (nanoplastic, arsenic), temperature increase and their combination on genome stability and cellular physiology of yeast strains with different levels of intrinsic GIN. Finally, we will explore the effect of these pollutants, temperature increase and their combination on the adaptation rate of yeast strains with different levels of intrinsic GIN. This program meets the pressing needs to assess the impact of major transitions, such as environmental changes on biodiversity, and to address the issues of its conservation, restoration and mobilization. Overall, in addition to the training of 7 HQP, this program will help to understand the impact of human activities on eukaryotic cell diversity and help decision-makers target the necessary efforts we need to create an ecologically sustainable future in Canada and all over the world
Programme
Discovery Grants Program - Individual
Bénéficiaire
Emplacement
Quebec, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data
Tel que publié
Application id
RGPIN-2023-05597
Name nom
Marsit, Souhir
Department département
Département de biologie, chimie et géographie
Organization id
58
Institution établissement
Université du Québec à Rimouski
Province en
Québec
Province fr
Québec
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2023
Competition year année de concours
2023
Award amount
33000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1501
Committee name en
Genes, Cells and Molecules
Committee name fr
Gènes, cellules et molécules
Area of application code
1201
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Life sciences (including biotechnology)
Area of application fr
Sciences de la vie (y compris biotechnologie)
Research subject code
5113
Research subject group en
Cell biology
Research subject group fr
Chromosomes
Research subject en
Biologie cellulaire
Research subject fr
Chromosomes
Application title
The impact of human activities on genome stability
Keyword
adaptation; aneuploidy; environmental stress; Genomic instability; molecular evolution; mutation rate; polyploidy; yeast
Application summary
Across the tree of life, genome content and organization are highly diverse. Deciphering the molecular mechanisms that drive this diversity is critical in the current context of global environmental change. Indeed, human activities affect natural ecological niches. However, understanding the impact of these disturbances on genome stability and consequently on evolution and adaptation is fundamental if we are to anticipate their consequences on biodiversity. An increased rate of alterations in the genome, known as genomic instability (GIN), leads to a higher frequency of mutations, chromosomal variations, and polyploidy. Although excessive GIN can be deleterious, moderate GIN may have several advantages. Increasing genetic variability in a population of cells could facilitate adaptation to stressful environments. However, the factors influencing the emergence of GIN and to which extent it may impact adaptation and speciation processes are still poorly understood. The classical evolutionary theory states that the mutation rate of an organism is independent of the environmental conditions. However, an increased mutation rate has been observed in bacteria when exposed to antibiotics. This suggests that environmental changes can influence not only natural selection, but also the amount and type of mutations available for selection. Despite advances in studies on the impact of environmental changes on different animal and plant species, how human activities affect genome stability and, consequently the adaptive potential of species remains underexplored. Our research program aims to use multidisciplinary approaches to investigate the impact of environmental stress caused by human activities on genome stability and its consequences on the adaptive potential using yeast as a model. First, we will determine the impact of the proximity to urban areas and industries on genetic and phenotypic diversity as well as on genome stability of natural yeast populations. We will assess whether yeast strains isolated in urban areas have a higher GIN than those from rural areas. Secondly, we will evaluate the impact of the presence of pollutants (nanoplastic, arsenic), temperature increase and their combination on genome stability and cellular physiology of yeast strains with different levels of intrinsic GIN. Finally, we will explore the effect of these pollutants, temperature increase and their combination on the adaptation rate of yeast strains with different levels of intrinsic GIN. This program meets the pressing needs to assess the impact of major transitions, such as environmental changes on biodiversity, and to address the issues of its conservation, restoration and mobilization. Overall, in addition to the training of 7 HQP, this program will help to understand the impact of human activities on eukaryotic cell diversity and help decision-makers target the necessary efforts we need to create an ecologically sustainable future in Canada and all over the world