Grant: Discovery Grants Program - Individual
Concordia University
$43,000.00
New analytical methods for global and targeted metabolomics
EF 2024-25
Résumé
Metabolomics is the science of large-scale analysis of all small molecule metabolites present in a given biospecimen in order to study dynamic processes occurring in living systems. Metabolomics is increasingly used in biomedicine, food science, agriculture and environmental sciences. However, the analytical methods for comprehensive measurement of hundreds of metabolites require better coverage of low abundance and signalling metabolites including their in-depth characterization across various types of biospecimens; lack adequate validation and harmonization and cannot be easily adopted to microscale quantities of tissue. Thus, the long-term objective of the proposed research program is to establish novel analytical methods in global and targeted metabolomics with the primary focus on improving the detection and identification of low abundance and unstable metabolites in biological fluids and tissues using liquid chromatography - high-resolution mass spectrometry (LC-HRMS).
To achieve this objective, my 5-year research program will establish novel LC-HRMS assays for poorly characterized NO2-modified lipids. Rigorous validation of the developed methods will be carried out including systematic evaluation of metabolite stability, recovery and ionization suppression effects, all of which remain critical issues severely impacting the quality of many current studies. Next, we will develop a complementary series of novel untargeted LC-MS metabolomics workflows focusing on class-specific extraction, isomer separation and MS analysis of phase II metabolites, to introduce for the first time deep comprehensive profiling of these species and expand the coverage of relevant spectral libraries for metabolite identification. Finally, we will perform fundamental studies to examine electrospray ionization behaviour of various metabolite classes, including systematic studies of ionization suppression and adduct formation of selected metabolites within and across classes in various biospecimen types. These studies will also be combined with standard addition calibration to probe the influence of the adduct selection on the overall method accuracy for a given lipid. These investigations will support better selection of internal standards and mobile phase additives to increase sensitivity and accuracy of targeted and untargeted metabolomics.
Collectively, this research program will establish new analytical approaches to measure currently "unmeasurable" low abundance metabolites and will advance the fields of metabolomics and exposomics by (i) increasing metabolite coverage of modified lipids and phase II metabolites including the expansion of public metabolite databases and comprehensive phase II metabolism mapping and (ii) controlling metabolite susceptibility to ionization suppression and adduct formation to guide the design of more accurate metabolomics methods and aid in harmonization efforts.
Programme
Discovery Grants Program - Individual
Bénéficiaire
Emplacement
Quebec, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data
Tel que publié
Application id
RGPIN-2024-06392
Name nom
Vuckovic, Dajana
Department département
Chemistry and Biochemistry
Organization id
70
Institution établissement
Concordia University
Province en
Québec
Province fr
Québec
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2024
Competition year année de concours
2024
Award amount
43000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1504
Committee name en
Chemistry
Committee name fr
Chimie
Area of application code
1200
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Advancement of knowledge
Area of application fr
Avancement des connaissances
Research subject code
3504
Research subject group en
Analytical chemistry
Research subject group fr
Chimie analytique
Research subject en
Bioanalytical chemistry
Research subject fr
Chimie bioanalytique
Field of research list names en
Not available
Field of research list names fr
Non disponible
Socioeconomic objective list names en
Not available
Socioeconomic objective list names fr
Non disponible
Application title
New analytical methods for global and targeted metabolomics
Keywords
metabolomics; lipidomics; mass spectrometry; liquid chromatography; electrospray ionization; bioanalysis; method validation; metabolite identification
Application summary
Metabolomics is the science of large-scale analysis of all small molecule metabolites present in a given biospecimen in order to study dynamic processes occurring in living systems. Metabolomics is increasingly used in biomedicine, food science, agriculture and environmental sciences. However, the analytical methods for comprehensive measurement of hundreds of metabolites require better coverage of low abundance and signalling metabolites including their in-depth characterization across various types of biospecimens; lack adequate validation and harmonization and cannot be easily adopted to microscale quantities of tissue. Thus, the long-term objective of the proposed research program is to establish novel analytical methods in global and targeted metabolomics with the primary focus on improving the detection and identification of low abundance and unstable metabolites in biological fluids and tissues using liquid chromatography - high-resolution mass spectrometry (LC-HRMS).
To achieve this objective, my 5-year research program will establish novel LC-HRMS assays for poorly characterized NO2-modified lipids. Rigorous validation of the developed methods will be carried out including systematic evaluation of metabolite stability, recovery and ionization suppression effects, all of which remain critical issues severely impacting the quality of many current studies. Next, we will develop a complementary series of novel untargeted LC-MS metabolomics workflows focusing on class-specific extraction, isomer separation and MS analysis of phase II metabolites, to introduce for the first time deep comprehensive profiling of these species and expand the coverage of relevant spectral libraries for metabolite identification. Finally, we will perform fundamental studies to examine electrospray ionization behaviour of various metabolite classes, including systematic studies of ionization suppression and adduct formation of selected metabolites within and across classes in various biospecimen types. These studies will also be combined with standard addition calibration to probe the influence of the adduct selection on the overall method accuracy for a given lipid. These investigations will support better selection of internal standards and mobile phase additives to increase sensitivity and accuracy of targeted and untargeted metabolomics.
Collectively, this research program will establish new analytical approaches to measure currently "unmeasurable" low abundance metabolites and will advance the fields of metabolomics and exposomics by (i) increasing metabolite coverage of modified lipids and phase II metabolites including the expansion of public metabolite databases and comprehensive phase II metabolism mapping and (ii) controlling metabolite susceptibility to ionization suppression and adduct formation to guide the design of more accurate metabolomics methods and aid in harmonization efforts.