Grant: Discovery Grants Program - Individual
The University of Western Ontario
$40,000.00
Conservation genomics of wildlife populations in the Anthropocene
EF 2024-25
Résumé
Individuals vary, and variation among individuals is determined by genes and the environment. Genetic variation among individuals is the fuel for evolution, as evolution follows when selection acts on genetic variation. My long-term aim is to characterize the genetic basis of individual variation in long-term studies of wild populations. In doing so, my trainees and I seek to better understand how wildlife may adapt to changing environments and respond to human-induced selection. Over the next 5 years, I propose to discover, characterize, and validate the genetic basis of variation in traits related to fitness in long-term studies of bighorn sheep and grey seals.
We have recently discovered genes associated with fitness-related traits in the bighorn population at Ram Mountain, Alberta using DNA profiling. Our next goal is to test the idea that rams harvested at an early age have genes for rapid horn growth, leading to the evolution of shorter horned rams. This will be accomplished by DNA profiling province-wide trophy harvested animals. Our second goal is to genetically assess the recent translocation of bighorns from the Cadomin population to determine if and how the translocation accomplished a genetic rescue (the consequent recovery of population size and genetic diversity) of the Ram Mountain population.
We will also apply DNA profiling to a second bighorn population at the Bison Range in Montana. Bighorns were first introduced here in 1922. The population was isolated and became inbred until the 1980s, when translocations led to a genetic rescue and recovery of diversity. However, in the spring of 2016, an outbreak of pneumonia killed 85% of the population in less than one year despite the post-rescue vigor and genetic diversity. Our goal here is to find genes that caused the initial genetic rescue and determine whether they contribute to survival of the recent pneumonia outbreak. This study will help us understand whether genetic rescue protects against unexpected disease outbreaks.
Our third study investigates the basis of individual variation in reproduction and survival in a long-term study of grey seals on Sable Island, Nova Scotia. Females vary in their "quality", as some breed younger, have larger pups and tend to live longer than others. We aim to investigate the basis of the variation using two approaches. First, we will compare biomarkers for physiological aging (telomere DNA and DNA methylation, measured at early and later known chronological ages) between high- and low-quality individuals to test the idea that high-quality individuals age biologically less rapidly. Second, we plan to sequence the genomes of high- and low-quality individuals to discover variants that are linked to reproduction, longevity, and biological ageing. This study will help us understand the genetic underpinnings of variation in individual quality and the biology of ageing.
Programme
Discovery Grants Program - Individual
Bénéficiaire
Emplacement
Ontario, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data
Tel que publié
Application id
RGPIN-2024-04425
Name nom
Coltman, David
Department département
Biology - Biology
Organization id
36
Institution établissement
The University of Western Ontario
Province en
Ontario
Province fr
Ontario
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2024
Competition year année de concours
2024
Award amount
40000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1503
Committee name en
Evolution and Ecology
Committee name fr
Évolution et écologie
Area of application code
1200
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Advancement of knowledge
Area of application fr
Avancement des connaissances
Research subject code
4700
Research subject group en
Evolution and ecology
Research subject group fr
Évolution et écologie
Research subject en
Evolution and ecology
Research subject fr
Évolution et écologie
Field of research list names en
Not available
Field of research list names fr
Non disponible
Socioeconomic objective list names en
Not available
Socioeconomic objective list names fr
Non disponible
Application title
Conservation genomics of wildlife populations in the Anthropocene
Keywords
genomics; heritability; inbreeding; life-history; molecular ecology; natural selection; population genetics; quantitative genetics; single nucleotide polymorphism; wildlife
Application summary
Individuals vary, and variation among individuals is determined by genes and the environment. Genetic variation among individuals is the fuel for evolution, as evolution follows when selection acts on genetic variation. My long-term aim is to characterize the genetic basis of individual variation in long-term studies of wild populations. In doing so, my trainees and I seek to better understand how wildlife may adapt to changing environments and respond to human-induced selection. Over the next 5 years, I propose to discover, characterize, and validate the genetic basis of variation in traits related to fitness in long-term studies of bighorn sheep and grey seals.
We have recently discovered genes associated with fitness-related traits in the bighorn population at Ram Mountain, Alberta using DNA profiling. Our next goal is to test the idea that rams harvested at an early age have genes for rapid horn growth, leading to the evolution of shorter horned rams. This will be accomplished by DNA profiling province-wide trophy harvested animals. Our second goal is to genetically assess the recent translocation of bighorns from the Cadomin population to determine if and how the translocation accomplished a genetic rescue (the consequent recovery of population size and genetic diversity) of the Ram Mountain population.
We will also apply DNA profiling to a second bighorn population at the Bison Range in Montana. Bighorns were first introduced here in 1922. The population was isolated and became inbred until the 1980s, when translocations led to a genetic rescue and recovery of diversity. However, in the spring of 2016, an outbreak of pneumonia killed 85% of the population in less than one year despite the post-rescue vigor and genetic diversity. Our goal here is to find genes that caused the initial genetic rescue and determine whether they contribute to survival of the recent pneumonia outbreak. This study will help us understand whether genetic rescue protects against unexpected disease outbreaks.
Our third study investigates the basis of individual variation in reproduction and survival in a long-term study of grey seals on Sable Island, Nova Scotia. Females vary in their "quality", as some breed younger, have larger pups and tend to live longer than others. We aim to investigate the basis of the variation using two approaches. First, we will compare biomarkers for physiological aging (telomere DNA and DNA methylation, measured at early and later known chronological ages) between high- and low-quality individuals to test the idea that high-quality individuals age biologically less rapidly. Second, we plan to sequence the genomes of high- and low-quality individuals to discover variants that are linked to reproduction, longevity, and biological ageing. This study will help us understand the genetic underpinnings of variation in individual quality and the biology of ageing.