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Grant: Research Tools and Instruments - Category 1 (<$150,000)

Université du Québec à Trois-Rivières

$84,953.00

Plant transcriptomic and metabolomic core platform

EF 2014-15

Résumé
Plants react to their environment and modulate the transcription of their genes to maximize survival and growth. The outcomes of transcriptomic changes results in various proteins being expressed to manufacture the compounds befitting the situation prevailing in the plant environment. Such compounds are termed metabolites and represent a formidable reservoir of millions of molecules present in plants. The equipment requested in the proposal aims the two following goals; 1) monitor plant gene expression 2) quantify the amount and diversity of various metabolites produced by plants. The two laboratories requesting the equipment are led by young professors (hired in 2012 and 2013 respectively) whose research programs are funded by NSERC (Discovery and Engage), FRQNT (Nouveau chercheur) and an institutional research chair (UQTR). While both PI have been successful at obtaining operating grant, they (and their department) lack the adequate equipment to monitor gene expression and metabolome variation despite the fact that these simple equipment are at the basis of their Discovery research program. Both research programs use research-based systems biology such as the integration of transcriptome and metabolome data to elucidate different plant processes. Specifically, Dr. Germain's research program focuses on plant immune response to biotrophic pathogen a process involving the implication of several genes regulated by the phytohormone salicylic acid whose level can only be monitored by HPLC. Dr. Desgagné-Penix research aims the elucidation of biochemical pathways, specifically the biosynthesis of isoquinoline alkaloids (e.g. galanthamine, an Alzheimer's disease drug treatment; narciclasine, an anti-cancer agent; and crinine, an antimicrobial compound) in non-model plants. Successful elucidation of such pathways requires the comparison of gene expression between plant producing (or not) the given metabolite alkaloid (itself monitored by HPLC). Hence, as outlined in their Discovery grant, gene expression and metabolite profiling is crucial to their research program.
Programme
Research Tools and Instruments - Category 1 (<$150,000)
Emplacement
Quebec, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data

Tel que publié

Application id
472990-2015
Name nom
Germain, Hugo
Department département
Chimie-biologie
Organization id
59
Institution établissement
Université du Québec à Trois-Rivières
Province en
Québec
Province fr
Québec
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2014
Competition year année de concours
2015
Award amount
84953
Program id
EQPEQ
Program name en
Research Tools and Instruments - Category 1 (<$150,000)
Program name fr
Outils et instruments de recherche - catégorie 1 (<150 000$)
Group en
Discovery grants programs
Group fr
Programmes de subventions à la découverte
Committee code
1502
Committee name en
Biological Systems and Functions
Committee name fr
Systèmes et fonctions biologiques
Area of application code
1200
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Advancement of knowledge
Area of application fr
Avancement des connaissances
Research subject code
5100
Research subject group en
Cell biology
Research subject group fr
Biologie cellulaire
Research subject en
Cell biology
Research subject fr
Biologie cellulaire
Partie
1
Nb partie
1
Application title
Plant transcriptomic and metabolomic core platform
Keyword
NSERC
Application summary
Plants react to their environment and modulate the transcription of their genes to maximize survival and growth. The outcomes of transcriptomic changes results in various proteins being expressed to manufacture the compounds befitting the situation prevailing in the plant environment. Such compounds are termed metabolites and represent a formidable reservoir of millions of molecules present in plants. The equipment requested in the proposal aims the two following goals; 1) monitor plant gene expression 2) quantify the amount and diversity of various metabolites produced by plants. The two laboratories requesting the equipment are led by young professors (hired in 2012 and 2013 respectively) whose research programs are funded by NSERC (Discovery and Engage), FRQNT (Nouveau chercheur) and an institutional research chair (UQTR). While both PI have been successful at obtaining operating grant, they (and their department) lack the adequate equipment to monitor gene expression and metabolome variation despite the fact that these simple equipment are at the basis of their Discovery research program. Both research programs use research-based systems biology such as the integration of transcriptome and metabolome data to elucidate different plant processes. Specifically, Dr. Germain's research program focuses on plant immune response to biotrophic pathogen a process involving the implication of several genes regulated by the phytohormone salicylic acid whose level can only be monitored by HPLC. Dr. Desgagné-Penix research aims the elucidation of biochemical pathways, specifically the biosynthesis of isoquinoline alkaloids (e.g. galanthamine, an Alzheimer's disease drug treatment; narciclasine, an anti-cancer agent; and crinine, an antimicrobial compound) in non-model plants. Successful elucidation of such pathways requires the comparison of gene expression between plant producing (or not) the given metabolite alkaloid (itself monitored by HPLC). Hence, as outlined in their Discovery grant, gene expression and metabolite profiling is crucial to their research program.