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Grant: Operating Grant

Université de Montréal

$989,235.00

Mechanisms of microbial RNA trans-splicing and editing - an integrated genomics and bioinformatics approach

EF 2008-09

Résumé
According to the central dogma of biology, genes encoded by DNA are transcribed into RNAs, which are then translated into proteins. Today, we know that RNA transcripts undergo numerous maturations steps to yield translatable RNAs. Typically, post-transcriptional RNA processing includes removal of introns and addition of a tail consisting of the base A. In addition, the sequence of some transcripts is changed ('RNA editing') or pasted together from distinct RNAs ('trans-splicing'). Several such instances have been observed in human, and they have been linked to the generation of enzyme isoforms in specialized tissue cells. Yet, the underlying molecular mechanisms of RNA editing and trans-splicing are not fully understood. We propose here to investigate RNA editing and trans-splicing in eukaryotic microbes - diplonemids - where these otherwise rare events are the rule. This work has potential long-term impacts on health research. First, dissection of the cellular machineries catalyzing these processes may expand the molecular tools for treating hereditary disorders at the RNA level. Second, these studies may also shed light on the evolution of the pathogenic microbes Leishmania and Trypanosoma, the causative agents of leishmaniasis and Chagas disease, since diplonemids are their free-living sistergroup.
Programme
Operating Grant
Emplacement
Quebec, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
CIHR Funding Decisions Database

Tel que publié

Id
171813
Name
Burger Gertraud
Region
Québec
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Genetics
Theme2
Biomedical
Prcname2
Genomics: Systems and computational biology
Projecttitle
Mechanisms of microbial RNA trans-splicing and editing - an integrated genomics and bioinformatics approach
Programtype2
Operating Grants
Orgnameinp2
Université de Montréal
Cihramount2
$989,235
Cihrequipment2
$0
Programname2
Operating Grant
Keyworddelim
Biology And Evolution Of Microbial Pathogens; Evolution Of Trans-Spliceosome And Editosome; Genome And Transcriptome Sequencing; In Silico Prediction Of Trans-Splicing And Editing Signals; Molecular Mechanism Of Trans-Splicing And Rna Editing; Protein Complexes Catalysing Trans-Splicing And Rna Editing
Abstract
According to the central dogma of biology, genes encoded by DNA are transcribed into RNAs, which are then translated into proteins. Today, we know that RNA transcripts undergo numerous maturations steps to yield translatable RNAs. Typically, post-transcriptional RNA processing includes removal of introns and addition of a tail consisting of the base A. In addition, the sequence of some transcripts is changed ('RNA editing') or pasted together from distinct RNAs ('trans-splicing'). Several such instances have been observed in human, and they have been linked to the generation of enzyme isoforms in specialized tissue cells. Yet, the underlying molecular mechanisms of RNA editing and trans-splicing are not fully understood. We propose here to investigate RNA editing and trans-splicing in eukaryotic microbes - diplonemids - where these otherwise rare events are the rule. This work has potential long-term impacts on health research. First, dissection of the cellular machineries catalyzing these processes may expand the molecular tools for treating hereditary disorders at the RNA level. Second, these studies may also shed light on the evolution of the pathogenic microbes Leishmania and Trypanosoma, the causative agents of leishmaniasis and Chagas disease, since diplonemids are their free-living sistergroup.
Competitiondate
200809
Approvedterm2
5 yrs 0 mth
Pinamesdelim
Burger, Gertraud
Approvedterm
5 ans 0 mois
Cihrcontribution2
~ $989,235~ $0~