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Grant: Discovery Grants Program - Individual

University of Alberta

$96,000.00

Photophysical properties of molecules: From biological imaging to new materials

EF 2024-25

Résumé
Computational study allows the interpretation of modern experimental measurements. Importantly, models can be developed to generalize observed behaviour, understand related systems, and design improved molecules or materials. Our research develops and uses theoretical and computational methods for understanding and predicting molecular structure and properties. The over-arching emphasis is on excited electronic states, which are connected to experimental observables (e.g., 1- or multi-photon absorption, light emission, photochemistry...). However, the problems and applications studied are diverse: (1) In biological imaging, the focus is on both fluorescent proteins and fluorescent nucleobase analogues, which mimic the structure and function of the natural nucleobase building blocks of DNA and RNA. Fluorescent proteins are useful probes of biological mechanisms, functions, and structures in molecular and cell biology. Meanwhile, fluorescent nucleobase analogues are needed because their natural counterparts are non-fluorescent, and thus cannot be used to observe DNA and RNA structure, function, and dynamics directly. For both classes of probes, there is rapidly developing research moving beyond one-photon absorption to two- or three-photon absorption, as the longer wavelengths used permit deeper penetration and allow better focus, which are critical needs for live cell or organism imaging. However, corresponding computational study is lagging behind experimental development. The proposed research aims to fill that gap. Overall, a diversity of multi-photon processes in biological probes will be examined with the goals of a better understanding of the underlying photophysics, rationalizing the connections between structure and photophysical properties, and assisting with the design of new improved probes specifically for multi-photon applications. (2) A number of new phosphorescent compounds containing tellurium and bismuth, rather than expensive transition metals, have recently been synthesized and characterized. Phosphorescence is the basis for many technologies, including light-emitting devices (LEDs). While a basic understanding of the photophysics has been obtained computationally, including qualitative ideas on why compounds are phosphorescent versus non-phosphorescent, a detailed understanding requires the use of more sophisticated quantum chemistry approaches than have been used to-date. Moreover, to understand the relative quantum yields, new tools will be developed and used to map the relaxation pathways following photoexcitation, which will lead to an improved understanding of the factors leading to higher (or lower) quantum yields, i.e., better or worse materials. Through these simulations of the properties of known compounds, we can rationally design new materials with improved spectral characteristics. (3) We will develop and apply methods for studying quantum dynamics in small molecules for atmospheric chemistry and astrochemistry.
Programme
Discovery Grants Program - Individual
Bénéficiaire
Emplacement
Alberta, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data

Tel que publié

Application id
RGPIN-2020-04347
Name nom
Brown, Alexander
Department département
Chemistry - Chemistry
Organization id
9
Institution établissement
University of Alberta
Province en
Alberta
Province fr
Alberta
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2024
Competition year année de concours
2020
Award amount
96000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1504
Committee name en
Chemistry
Committee name fr
Chimie
Area of application code
1200
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Advancement of knowledge
Area of application fr
Avancement des connaissances
Research subject code
3156
Research subject group en
Theoretical physics and chemistry
Research subject group fr
Physique et chimie théoriques
Research subject en
Quantum and/or computational chemistry
Research subject fr
Chimie quantique ou par modélisation numérique
Field of research list names en
Not available
Field of research list names fr
Non disponible
Socioeconomic objective list names en
Not available
Socioeconomic objective list names fr
Non disponible
Application title
Photophysical properties of molecules: From biological imaging to new materials
Keywords
quantum chemistry; quantum mechanical/molecular mechanical (qm/mm); fluorescent proteins; biofluorophores; multi-photon absorption; phosphorescent materials; mctdh; quantum dynamics; molecular dynamics; ab initio molecular dynamics
Application summary
Computational study allows the interpretation of modern experimental measurements. Importantly, models can be developed to generalize observed behaviour, understand related systems, and design improved molecules or materials. Our research develops and uses theoretical and computational methods for understanding and predicting molecular structure and properties. The over-arching emphasis is on excited electronic states, which are connected to experimental observables (e.g., 1- or multi-photon absorption, light emission, photochemistry...). However, the problems and applications studied are diverse: (1) In biological imaging, the focus is on both fluorescent proteins and fluorescent nucleobase analogues, which mimic the structure and function of the natural nucleobase building blocks of DNA and RNA. Fluorescent proteins are useful probes of biological mechanisms, functions, and structures in molecular and cell biology. Meanwhile, fluorescent nucleobase analogues are needed because their natural counterparts are non-fluorescent, and thus cannot be used to observe DNA and RNA structure, function, and dynamics directly. For both classes of probes, there is rapidly developing research moving beyond one-photon absorption to two- or three-photon absorption, as the longer wavelengths used permit deeper penetration and allow better focus, which are critical needs for live cell or organism imaging. However, corresponding computational study is lagging behind experimental development. The proposed research aims to fill that gap. Overall, a diversity of multi-photon processes in biological probes will be examined with the goals of a better understanding of the underlying photophysics, rationalizing the connections between structure and photophysical properties, and assisting with the design of new improved probes specifically for multi-photon applications. (2) A number of new phosphorescent compounds containing tellurium and bismuth, rather than expensive transition metals, have recently been synthesized and characterized. Phosphorescence is the basis for many technologies, including light-emitting devices (LEDs). While a basic understanding of the photophysics has been obtained computationally, including qualitative ideas on why compounds are phosphorescent versus non-phosphorescent, a detailed understanding requires the use of more sophisticated quantum chemistry approaches than have been used to-date. Moreover, to understand the relative quantum yields, new tools will be developed and used to map the relaxation pathways following photoexcitation, which will lead to an improved understanding of the factors leading to higher (or lower) quantum yields, i.e., better or worse materials. Through these simulations of the properties of known compounds, we can rationally design new materials with improved spectral characteristics. (3) We will develop and apply methods for studying quantum dynamics in small molecules for atmospheric chemistry and astrochemistry.