Grant: Research Tools and Instruments
University of Ottawa
$141,602.00
An optogenetic platform for high-throughput interrogation of cellular basis of physiological function in zebrafish
EF 2016-17
Résumé
We will take advantage of recent technological breakthroughs that now enable cellular function to be directly linked to animal physiology and behaviour. Determining the outcome of cell activity in multicellular organisms traditionally has been hampered by an inability to directly manipulate cells of interest, particularly in living animals. Most methods of studying cell function such as pharmacological agents or electrical stimulation are flawed owing to widespread off-target effects. Therefore, our ability to understand how cell function relates to physiology and behaviour is limited using these techniques. These limitations can now be overcome through the use of proteins that respond to light of specific wavelengths. Illuminating cells expressing these light-sensitive proteins can instantly shape the activity of the cells, while leaving other cells unaffected. By genetically controlling which cells express the light-sensitive molecules, an approach termed optogenetics, we can directly influence cell activity. The approach is particularly powerful in species with life stages where animals are transparent, so that light is readily transmitted to living tissue, as is the case for larval zebrafish. Optogenetics studies in zebrafish where changes in physiology or behaviour can be directly attributed to light-induced changes in cell activity have led to important advances in our understanding of animal physiology.
A multidisciplinary team of researchers at the University of Ottawa with expertise in studying cell function and animal physiology and behaviour in zebrafish will assemble an optogenetics system specialized for the study of zebrafish. This system will be comprised of two platforms. The first platform consists of a microscope and a light patterning device to enable the selective stimulation of targeted cells within specific regions of zebrafish larvae. The outcome of optogenetic stimulation will be monitored by a camera sufficiently fast and sensitive to detect even minute and rapid changes in cell signalling. This platform will allow us to study the role of cell activity on animal physiology at the microscopic level. A second platform will allow simultaneous observation and analysis of the behavioral consequences of optogenetic activation in up to 96 larval zebrafish at a time, dramatically increasing research output. Another component of this platform will enable the study of how optogenetic stimulation at larval stages shapes behaviour in adult stages. The proposed system will allow researchers to make fundamental insights into the roles of specific cell types on many important biological processes. Optogenetics is rapidly become a standard technique for physiological studies and our HQP will be provided with an invaluable opportunity for the cutting edge training needed for fields such as biology, biochemistry, biomedical engineering, ecology, and physiology.
Programme
Research Tools and Instruments
Bénéficiaire
Emplacement
Ontario, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data
Tel que publié
Application id
RTI-2017-00629
Name nom
Bui, Tuan
Department département
Biology - Biologie
Organization id
28
Institution établissement
University of Ottawa
Province en
Ontario
Province fr
Ontario
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2016
Competition year année de concours
2017
Award amount
141602
Program id
RTI
Program name en
Research Tools and Instruments
Program name fr
Outils et instruments de recherche
Group en
Discovery grants programs
Group fr
Programmes de subventions à la découverte
Committee code
1602
Committee name en
Biological Systems and Functions (RTI)
Committee name fr
Systèmes et fonctions biologiques (OIR)
Area of application code
1200
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Advancement of knowledge
Area of application fr
Avancement des connaissances
Research subject code
5504
Research subject group en
Animal biology
Research subject group fr
Biologie animale
Research subject en
Animal physiology and metabolism
Research subject fr
Physiologie et métabolisme des animaux
Partie
1
Nb partie
1
Application title
An optogenetic platform for high-throughput interrogation of cellular basis of physiological function in zebrafish
Keyword
NSERC
Application summary
We will take advantage of recent technological breakthroughs that now enable cellular function to be directly linked to animal physiology and behaviour. Determining the outcome of cell activity in multicellular organisms traditionally has been hampered by an inability to directly manipulate cells of interest, particularly in living animals. Most methods of studying cell function such as pharmacological agents or electrical stimulation are flawed owing to widespread off-target effects. Therefore, our ability to understand how cell function relates to physiology and behaviour is limited using these techniques. These limitations can now be overcome through the use of proteins that respond to light of specific wavelengths. Illuminating cells expressing these light-sensitive proteins can instantly shape the activity of the cells, while leaving other cells unaffected. By genetically controlling which cells express the light-sensitive molecules, an approach termed optogenetics, we can directly influence cell activity. The approach is particularly powerful in species with life stages where animals are transparent, so that light is readily transmitted to living tissue, as is the case for larval zebrafish. Optogenetics studies in zebrafish where changes in physiology or behaviour can be directly attributed to light-induced changes in cell activity have led to important advances in our understanding of animal physiology.
A multidisciplinary team of researchers at the University of Ottawa with expertise in studying cell function and animal physiology and behaviour in zebrafish will assemble an optogenetics system specialized for the study of zebrafish. This system will be comprised of two platforms. The first platform consists of a microscope and a light patterning device to enable the selective stimulation of targeted cells within specific regions of zebrafish larvae. The outcome of optogenetic stimulation will be monitored by a camera sufficiently fast and sensitive to detect even minute and rapid changes in cell signalling. This platform will allow us to study the role of cell activity on animal physiology at the microscopic level. A second platform will allow simultaneous observation and analysis of the behavioral consequences of optogenetic activation in up to 96 larval zebrafish at a time, dramatically increasing research output. Another component of this platform will enable the study of how optogenetic stimulation at larval stages shapes behaviour in adult stages. The proposed system will allow researchers to make fundamental insights into the roles of specific cell types on many important biological processes. Optogenetics is rapidly become a standard technique for physiological studies and our HQP will be provided with an invaluable opportunity for the cutting edge training needed for fields such as biology, biochemistry, biomedical engineering, ecology, and physiology.