Grant: Discovery Grants Program - Individual
University of Manitoba
$72,000.00
Delineating differential cellular stress signaling responses induced by reovirus
EF 2022-23
Résumé
Mammalian cells are complex entities consisting of tens of thousands of genes. These genes are expressed at different times and to different extents to produce the hundreds of thousands to millions of different cell proteins that coordinate all cellular activities involved in development, homeostasis, repair and immunity. This coordination is regulated by cell signaling pathways. Viruses use and disrupt cell signaling pathways. Viruses also are much simpler than cells, being composed of only a few genes and proteins. Thus, viruses continue to serve as superb models for understanding fundamental aspects of cell biology, including signaling pathways. My long-term goals are to delineate these signaling processes; to determine how a non-pathogenic mammalian reovirus (MRV) affects cellular signaling, how cell signaling perturbations enhance or disrupt viral processes, to determine which viral genes induce these signaling responses, to determine if, and which, post-translational modifications promote or abrogate signaling, and to precisely elucidate what molecular regions and domains of specific viral proteins are responsible for these signaling processes.These studies will improve our understanding of basic cell biology and of a critically important master regulator of cellular processes. My lab group previously published mass spectrometry-based analyses of MRV-infected cells and showed that the two most common MRV serotypes (type 1 Lang, T1L and type 3 Dearing, T3D) induced differential cellular protein responses. We also have preliminary quantitative aptamer-based results showing similar differential responses in cell signaling pathways.My group will continue its programmatic study of how MRV affect cellular signaling. Our short-term goals are to confirm and extend the preliminary aptamer studies to identify cell proteins that are significantly dysregulated, screen these significant proteins by RNA interference to knock down the corresponding genes to determine their effects upon virus and cellular functions, and exploit a novel genetic characteristic of MRV to map which regions of which viral proteins induce these signaling perturbations. Collectively, these studies will allow us to delineate important molecular components of fundamental cellular processes. The HQP who are trained in my laboratory have, and will continue, to benefit from our expertise in molecular biology and proteomics, and will acquire in-demand skill sets that will be broadly applicable in a wide variety of biologically important systems. These new HQP will be well equipped for careers in basic scientific research focused on biochemistry, biotechnology, genetics, molecular biology, and proteomics.
Programme
Discovery Grants Program - Individual
Bénéficiaire
Emplacement
Manitoba, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data
Tel que publié
Application id
RGPIN-2018-05003
Name nom
Coombs, Kevin
Department département
Medical Microbiology & Infectious Diseases - Medical Microbiology & Infectious Diseases
Organization id
19
Institution établissement
University of Manitoba
Province en
Manitoba
Province fr
Manitoba
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2022
Competition year année de concours
2018
Award amount
72000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1501
Committee name en
Genes, Cells and Molecules
Committee name fr
Gènes, cellules et molécules
Area of application code
1201
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Life sciences (including biotechnology)
Area of application fr
Sciences de la vie (y compris biotechnologie)
Research subject code
5200
Research subject group en
Microbiology
Research subject group fr
Microbiologie
Research subject en
Microbiology
Research subject fr
Microbiologie
Installment
inst:5;6
Partie
2
Nb partie
6
Application title
Delineating differential cellular stress signaling responses induced by reovirus
Application summary
Mammalian cells are complex entities consisting of tens of thousands of genes. These genes are expressed at different times and to different extents to produce the hundreds of thousands to millions of different cell proteins that coordinate all cellular activities involved in development, homeostasis, repair and immunity. This coordination is regulated by cell signaling pathways. Viruses use and disrupt cell signaling pathways. Viruses also are much simpler than cells, being composed of only a few genes and proteins. Thus, viruses continue to serve as superb models for understanding fundamental aspects of cell biology, including signaling pathways. My long-term goals are to delineate these signaling processes; to determine how a non-pathogenic mammalian reovirus (MRV) affects cellular signaling, how cell signaling perturbations enhance or disrupt viral processes, to determine which viral genes induce these signaling responses, to determine if, and which, post-translational modifications promote or abrogate signaling, and to precisely elucidate what molecular regions and domains of specific viral proteins are responsible for these signaling processes.These studies will improve our understanding of basic cell biology and of a critically important master regulator of cellular processes. My lab group previously published mass spectrometry-based analyses of MRV-infected cells and showed that the two most common MRV serotypes (type 1 Lang, T1L and type 3 Dearing, T3D) induced differential cellular protein responses. We also have preliminary quantitative aptamer-based results showing similar differential responses in cell signaling pathways.My group will continue its programmatic study of how MRV affect cellular signaling. Our short-term goals are to confirm and extend the preliminary aptamer studies to identify cell proteins that are significantly dysregulated, screen these significant proteins by RNA interference to knock down the corresponding genes to determine their effects upon virus and cellular functions, and exploit a novel genetic characteristic of MRV to map which regions of which viral proteins induce these signaling perturbations. Collectively, these studies will allow us to delineate important molecular components of fundamental cellular processes. The HQP who are trained in my laboratory have, and will continue, to benefit from our expertise in molecular biology and proteomics, and will acquire in-demand skill sets that will be broadly applicable in a wide variety of biologically important systems. These new HQP will be well equipped for careers in basic scientific research focused on biochemistry, biotechnology, genetics, molecular biology, and proteomics.