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Grant: Discovery Grants Program - Individual

Université d'Ottawa

$64,000.00

Harnessing synthesis and biosynthesis to access complex molecules

EF 2023-24

Résumé
Enzymatic chemistry is a powerful tool for the production of complex molecules such as fine and research chemicals, nutraceuticals, and pharmaceuticals. A major limitation to the use of enzymes for research and industrial synthesis is the restricted chemical diversity currently accessible through known enzymatic reactions. This is in stark contrast to synthetic organic chemistry. The structures of natural products show that enzymatic reactions can access incredible chemical diversity. My research program examines the biosynthetic pathways responsible for natural product production to identify and harness enzymes capable of expanding our enzymatic toolbox. Our long term goal is to use biosynthetic enzymes and their mutants to enable rapid production of diverse molecules in vivo and in vitro. To achieve this our immediate goals are to developing new catalysts that can be used in chemoenzymatic synthesis of natural products. As natural product total synthesis is a rigorous testing ground for new chemical methodology, successful integration of new enzymes in this arena will facilitate their broader application in research and manufacturing. To meet our long-term goal of expanding the toolbox of available enzymatic reactions, we propose three short-term objectives. 1) Development of macrocyclization biocatalysts. Macrocyclization is the most decisive step of a synthesis and can define the overall efficiency of any synthetic route. No biocatalyst has been developed to synthesize this key functional group. We will characterize and engineer thioesterases to macrocyclize a broad range of substrates, significantly impacting the synthetic chemistry and enzymology communities. 2) The chemoenzymatic total synthesis of polyketides. Natural product total synthesis is a rigorous testing ground for new chemical methodologies. Using polyketide synthases from multiple biosynthetic pathways, we will convert a complex synthetic substrate into the sponge derived marine natural product neopeltolide. This chemoenzymatic synthesis will be the first of its kind and demonstrate of the use of polyketide synthases in the late stages of complex molecule total synthesis, transforming complex polyketide synthesis. 3) New biocatalyst discovery. To provide greater access to chemical diversity, we will characterize enzymes from newly discovered biosynthetic pathways that catalyze formation of diverse functional groups. This work will expand our understanding of biosynthesis and increase the type of chemistry accessible from enzymatic reactions.
Programme
Discovery Grants Program - Individual
Bénéficiaire
Emplacement
Ontario, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data

Tel que publié

Application id
RGPIN-2019-06859
Name nom
Boddy, Christopher
Department département
Chemistry - Chimie
Organization id
28
Institution établissement
Université d'Ottawa
Province en
Ontario
Province fr
Ontario
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2023
Competition year année de concours
2019
Award amount
64000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1504
Committee name en
Chemistry
Committee name fr
Chimie
Area of application code
500
Area of application group en
Manufacturing processes and products
Area of application group fr
Procédés et produits industriels
Area of application en
Manufacturing processes and products
Area of application fr
Procédés et produits industriels
Research subject code
5404
Research subject group en
Biochemistry
Research subject group fr
Enzymes
Research subject en
Biochimie
Research subject fr
Enzymes
Application title
Harnessing synthesis and biosynthesis to access complex molecules
Keyword
biocatalysis; biosynthesis; chemical diversity; chemoenzymatic synthesis; de novo biosynthesis; enzymology; microbiology; natural products; polyketides; synthesis
Application summary
Enzymatic chemistry is a powerful tool for the production of complex molecules such as fine and research chemicals, nutraceuticals, and pharmaceuticals. A major limitation to the use of enzymes for research and industrial synthesis is the restricted chemical diversity currently accessible through known enzymatic reactions. This is in stark contrast to synthetic organic chemistry. The structures of natural products show that enzymatic reactions can access incredible chemical diversity. My research program examines the biosynthetic pathways responsible for natural product production to identify and harness enzymes capable of expanding our enzymatic toolbox. Our long term goal is to use biosynthetic enzymes and their mutants to enable rapid production of diverse molecules in vivo and in vitro. To achieve this our immediate goals are to developing new catalysts that can be used in chemoenzymatic synthesis of natural products. As natural product total synthesis is a rigorous testing ground for new chemical methodology, successful integration of new enzymes in this arena will facilitate their broader application in research and manufacturing. To meet our long-term goal of expanding the toolbox of available enzymatic reactions, we propose three short-term objectives. 1) Development of macrocyclization biocatalysts. Macrocyclization is the most decisive step of a synthesis and can define the overall efficiency of any synthetic route. No biocatalyst has been developed to synthesize this key functional group. We will characterize and engineer thioesterases to macrocyclize a broad range of substrates, significantly impacting the synthetic chemistry and enzymology communities. 2) The chemoenzymatic total synthesis of polyketides. Natural product total synthesis is a rigorous testing ground for new chemical methodologies. Using polyketide synthases from multiple biosynthetic pathways, we will convert a complex synthetic substrate into the sponge derived marine natural product neopeltolide. This chemoenzymatic synthesis will be the first of its kind and demonstrate of the use of polyketide synthases in the late stages of complex molecule total synthesis, transforming complex polyketide synthesis. 3) New biocatalyst discovery. To provide greater access to chemical diversity, we will characterize enzymes from newly discovered biosynthetic pathways that catalyze formation of diverse functional groups. This work will expand our understanding of biosynthesis and increase the type of chemistry accessible from enzymatic reactions.