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Grant: Collaborative Research and Development Grants

University of Victoria

$3,900.00

CoastCheck: Establishment of robust eDNA assays to assess organic pollution impacts on infaunal macrobenthic invertebrate communities in coastal waters of British Columbia

EF 2019-20

Résumé
Provincially- and federally-mandated programs for wastewater and environmental effects monitoring require an assessment of the health of marine invertebrate communities that live in the soft sediments at the sea bottom. Biologica has provided taxonomic identification services for government and industry for over 20 years using traditional sorting and visual classification methods. However, this approach is very time-consuming, costly, and technically challenging. There is a need to expand and improve upon the reliability of monitoring these invertebrates. All living organisms are defined by their genetic material and this DNA is released into the environment. This ""environmental DNA (eDNA)"" can be detected using sensitive and accurate molecular tests on water and sediment samples. The overall project goal is to develop robust, targeted eDNA-based tests to assess the impact of organic pollution on invertebrates that live in sediments of marine areas. The CRD project combines the expertise of academic (University of Victoria), industry (Biologica), and wastewater management service providers (the Capital Regional District of Victoria and the Greater Vancouver Sewerage and Drainage District) to address two main objectives: 1) to develop and validate eDNA tests for verified specimens of invertebrate species of interest, and 2) to create a robust, standardized eDNA field sampling approach for marine coastal community assessments of organic pollution impacts using invertebrates that live in sea bottom sediments. This will be accomplished in three specific aims: 1) to obtain high quality DNA sequences from verified specimens, 2) to develop and validate eDNA tests for select invertebrates, and 3) to apply the eDNA tests in real-world scenarios. The routine application of these new eDNA tools will revolutionize the taxonomy service industry and how environmental impacts of wastewater are assessed.
Programme
Collaborative Research and Development Grants
Emplacement
British Columbia, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data

Tel que publié

Application id
531846-2018
Name nom
Helbing, Caren
Department département
Biochemistry and Microbiology
Organization id
7
Institution établissement
University of Victoria
Province en
British Columbia
Province fr
Colombie-Britannique
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2019
Competition year année de concours
2018
Award amount
3900
Program id
CRDPJ
Program name en
Collaborative Research and Development Grants
Program name fr
Subventions de recherche et développement coopérative
Group en
RESEARCH PARTNERSHIPS
Group fr
PARTENARIATS DE RECHERCHE
Committee code
96
Committee name en
RPP Internal Decision Cttee
Committee name fr
Cté de décision interne - PPR
Area of application code
409
Area of application group en
Environment
Area of application group fr
Environnement
Area of application en
Environmental impact of economic activities (including agriculture)
Area of application fr
Effet des activités économiques sur l'environnement (y compris agriculture)
Research subject code
5300
Research subject group en
Molecular biology
Research subject group fr
Biologie moléculaire
Research subject en
Molecular biology
Research subject fr
Biologie moléculaire
Installment
inst:1 - 1
Partie
1
Nb partie
1
Application title
CoastCheck: Establishment of robust eDNA assays to assess organic pollution impacts on infaunal macrobenthic invertebrate communities in coastal waters of British Columbia
Keyword
NSERC
Application summary
Provincially- and federally-mandated programs for wastewater and environmental effects monitoring require an assessment of the health of marine invertebrate communities that live in the soft sediments at the sea bottom. Biologica has provided taxonomic identification services for government and industry for over 20 years using traditional sorting and visual classification methods. However, this approach is very time-consuming, costly, and technically challenging. There is a need to expand and improve upon the reliability of monitoring these invertebrates. All living organisms are defined by their genetic material and this DNA is released into the environment. This ""environmental DNA (eDNA)"" can be detected using sensitive and accurate molecular tests on water and sediment samples. The overall project goal is to develop robust, targeted eDNA-based tests to assess the impact of organic pollution on invertebrates that live in sediments of marine areas. The CRD project combines the expertise of academic (University of Victoria), industry (Biologica), and wastewater management service providers (the Capital Regional District of Victoria and the Greater Vancouver Sewerage and Drainage District) to address two main objectives: 1) to develop and validate eDNA tests for verified specimens of invertebrate species of interest, and 2) to create a robust, standardized eDNA field sampling approach for marine coastal community assessments of organic pollution impacts using invertebrates that live in sea bottom sediments. This will be accomplished in three specific aims: 1) to obtain high quality DNA sequences from verified specimens, 2) to develop and validate eDNA tests for select invertebrates, and 3) to apply the eDNA tests in real-world scenarios. The routine application of these new eDNA tools will revolutionize the taxonomy service industry and how environmental impacts of wastewater are assessed.