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Grant: Discovery Grants Program - Individual

University of Manitoba

$55,000.00

Examining and charactering the impact ubiquitin homeostasis has on chromosome stability in higher eukaryotes

EF 2024-25

Résumé
BACKGROUND: A stable genome is a fundamental property of all eukaryotes that is vital to the maintenance and accurate partitioning of DNA into daughter cells. Thus, genome stability is essential for normal cell function, physiology and species survival. Chromosome stability (CS), or the accurate maintenance of normal chromosome numbers and DNA content is vital for genome stability, yet a huge gap exists in our fundamental understanding of the genes, proteins and pathways (i.e., molecular determinants) that regulate CS. My NSERC Discovery program seeks to fill this gap by identifying and functionally characterizing the molecular determinants of CS, to gain unprecedented insight into normal cell function and physiology. VISION & APPROACH: My overarching and long-term vision is to expand our rudimentary understanding of the mechanisms required for CS in higher eukaryotes. My previous discovery grant (DG) developed novel, quantitative imaging microscopy (QuantIM) tools to rapidly identify and functionally evaluate CS genes and proteins. Bolstered by industrial partnerships that enhance my analytical capabilities and throughput, I am now applying these innovative tools to gain unparalleled insight into the molecular determinants of CS. My data now point to the potential importance of ubiquitin homeostasis as a key regulator of CS in higher eukaryotes. Ubiquitin is a small polypeptide found in all eukaryotes that can be covalently attached to target proteins to regulate function by affecting cellular localization, protein interactions and degradation. In humans there are 1024 genes that regulate ubiquitin homeostasis including 929 ubiquitination and 95 deubiquitination genes, that add and remove ubiquitin from targets, respectively. Using our CRISPR and QuantIM tools, my team will create novel models enabling us to define the underlying mechanisms required for CS. By employing biochemical, cell biology, genetic and proteomic tools, we will gain a detailed understanding of the fundamental roles ubiquitin homeostasis has in CS. IMPACT: Overall, my DG will yield important new knowledge that will greatly advance our fundamental understanding of CS and its impact on normal cell function and physiology in higher eukaryotes. Thus, my DG will impact and be of interest to geneticists and cell biologists but will also generate applied/translational interest as well. TRAINING: I have built a training ecosystem committed to removing systemic barriers and biases, recognizing the strength diversity has to offer and ensuring that all HQP are supported equally with each valued and respected for their contributions. I will train ~15 HQP over the next 5 years. HQP benefit from my productive and collaborative natural sciences and engineering environment, where they receive extensive technical and theoretical training to advance their specific projects, which will strategically position them for related training and future job prospects within academia and industry.
Programme
Discovery Grants Program - Individual
Emplacement
Manitoba, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data

Tel que publié

Application id
RGPIN-2024-04887
Name nom
McManus, Kirk
Department département
Biochemistry & Medical Genetics
Organization id
19
Institution établissement
University of Manitoba
Province en
Manitoba
Province fr
Manitoba
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2024
Competition year année de concours
2024
Award amount
55000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
DISCOVERY RESEARCH
Group fr
RECHERCHE AXÉE SUR LA DÉCOUVERTE
Committee code
1501
Committee name en
Genes, Cells and Molecules
Committee name fr
Gènes, cellules et molécules
Area of application code
1201
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Life sciences (including biotechnology)
Area of application fr
Sciences de la vie (y compris biotechnologie)
Research subject code
5100
Research subject group en
Cell biology
Research subject group fr
Biologie cellulaire
Research subject en
Cell biology
Research subject fr
Biologie cellulaire
Field of research list names en
Not available
Field of research list names fr
Non disponible
Socioeconomic objective list names en
Not available
Socioeconomic objective list names fr
Non disponible
Application title
Examining and charactering the impact ubiquitin homeostasis has on chromosome stability in higher eukaryotes
Keywords
cellular & molecular biology; chromosome stability; chromosome biology & dynamics; crispr/cas9, crispri & rnai (si/shrna); genetics & cytogenetics; high-content imaging; mammalian tissue culture; mitotic fidelity; quantitative imaging microscopy (quantim); ubiquitin proteasome system
Application summary
BACKGROUND: A stable genome is a fundamental property of all eukaryotes that is vital to the maintenance and accurate partitioning of DNA into daughter cells. Thus, genome stability is essential for normal cell function, physiology and species survival. Chromosome stability (CS), or the accurate maintenance of normal chromosome numbers and DNA content is vital for genome stability, yet a huge gap exists in our fundamental understanding of the genes, proteins and pathways (i.e., molecular determinants) that regulate CS. My NSERC Discovery program seeks to fill this gap by identifying and functionally characterizing the molecular determinants of CS, to gain unprecedented insight into normal cell function and physiology. VISION & APPROACH: My overarching and long-term vision is to expand our rudimentary understanding of the mechanisms required for CS in higher eukaryotes. My previous discovery grant (DG) developed novel, quantitative imaging microscopy (QuantIM) tools to rapidly identify and functionally evaluate CS genes and proteins. Bolstered by industrial partnerships that enhance my analytical capabilities and throughput, I am now applying these innovative tools to gain unparalleled insight into the molecular determinants of CS. My data now point to the potential importance of ubiquitin homeostasis as a key regulator of CS in higher eukaryotes. Ubiquitin is a small polypeptide found in all eukaryotes that can be covalently attached to target proteins to regulate function by affecting cellular localization, protein interactions and degradation. In humans there are 1024 genes that regulate ubiquitin homeostasis including 929 ubiquitination and 95 deubiquitination genes, that add and remove ubiquitin from targets, respectively. Using our CRISPR and QuantIM tools, my team will create novel models enabling us to define the underlying mechanisms required for CS. By employing biochemical, cell biology, genetic and proteomic tools, we will gain a detailed understanding of the fundamental roles ubiquitin homeostasis has in CS. IMPACT: Overall, my DG will yield important new knowledge that will greatly advance our fundamental understanding of CS and its impact on normal cell function and physiology in higher eukaryotes. Thus, my DG will impact and be of interest to geneticists and cell biologists but will also generate applied/translational interest as well. TRAINING: I have built a training ecosystem committed to removing systemic barriers and biases, recognizing the strength diversity has to offer and ensuring that all HQP are supported equally with each valued and respected for their contributions. I will train ~15 HQP over the next 5 years. HQP benefit from my productive and collaborative natural sciences and engineering environment, where they receive extensive technical and theoretical training to advance their specific projects, which will strategically position them for related training and future job prospects within academia and industry.