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Grant: Catalyst Grant: Analysis of CLSA Data - IPPH Mandate Early Career Researcher

Montreal Heart Institute

$70,000.00

Expanding CLSA PheWeb: Interactive visualization of ordinal categorical genetic variant-phenotype associations and time-to-event associations

EF 2024-25

Résumé
The CLSA study collected data on thousands of traits and hundreds of millions of genetic variants in almost thirty thousand Canadians. Manually sifting through all the resulting gene- disease association results, trait by trait and variant by variant, is neither an efficient nor comprehensive way to foster discoveries. Efficiently translating such massive amounts of results into new understandings of health and disease for Canadians requires making the association results from large-scale genetic studies accessible to researchers in an intuitive and easy-to-use manner. In previous work, we built the base version of PheWeb - our web-based interactive tool for visualizing and browsing through hundreds or thousands of genetic association results efficiently and intuitively. However, key data types that will be crucial to better understand the genetic factors associated with complex traits in this Canadian cohort were excluded, namely traits with 3+ options and data across time points (baseline and the follow-up visits). In the current proposal, we aim to analyze these two less-studied data types and to extend PheWeb to support those results. The goal is to make all CLSA association results available to researchers at their fingertips, which will facilitate data sharing and collaboration.
Programme
Catalyst Grant: Analysis of CLSA Data - IPPH Mandate Early Career Researcher
Emplacement
Quebec, Canada
Type
Grant
Source
CIHR Funding Decisions Database

Tel que publié

Id
521915
Name
Gagliano Taliun Sarah A
Region
Québec
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Genetics
Theme2
Biomedical
Prcname2
Catalyst Grant: Analysis of CLSA Data
Projecttitle
Expanding CLSA PheWeb: Interactive visualization of ordinal categorical genetic variant-phenotype associations and time-to-event associations
Programtype2
Operating Grants
Orgnameinp2
Montreal Heart Institute
Cihramount2
$70,000
Cihrequipment2
$0
Programname2
Catalyst Grant: Analysis of CLSA Data - IPPH Mandate Early Career Researcher
Keyworddelim
Genome-Wide Association; Longitudinal Data; Ordinal Categorical Data
Abstract
The CLSA study collected data on thousands of traits and hundreds of millions of genetic variants in almost thirty thousand Canadians. Manually sifting through all the resulting gene- disease association results, trait by trait and variant by variant, is neither an efficient nor comprehensive way to foster discoveries. Efficiently translating such massive amounts of results into new understandings of health and disease for Canadians requires making the association results from large-scale genetic studies accessible to researchers in an intuitive and easy-to-use manner. In previous work, we built the base version of PheWeb - our web-based interactive tool for visualizing and browsing through hundreds or thousands of genetic association results efficiently and intuitively. However, key data types that will be crucial to better understand the genetic factors associated with complex traits in this Canadian cohort were excluded, namely traits with 3+ options and data across time points (baseline and the follow-up visits). In the current proposal, we aim to analyze these two less-studied data types and to extend PheWeb to support those results. The goal is to make all CLSA association results available to researchers at their fingertips, which will facilitate data sharing and collaboration.
Competitiondate
202410
Approvedterm2
1 yr 0 mth
Pinamesdelim
Gagliano Taliun, Sarah A; Taliun, Daniel
Approvedterm
1 an 0 mois
Cihrcontribution2
IPPH~ $70,000~ $0~