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Grant: Discovery Grants Program - Individual

University of British Columbia

$70,000.00

Computational models of eukaryotic cell polarization/motility

EF 2014-15

Résumé
Cell motility is of fundamental importance in development, immune surveillance, and wound healing in eukaryotes. It also plays a nefarious role in metastasis in cancer. The actin cytoskeleton, which shapes the cell and drives protrusive motility is regulated by layers of signaling pathways. A focal question that motivates my research is how spatio-temporal dynamics of such signaling molecules are coordinated, and how these then combine to produce directed cell motility. My work includes derivation and analysis of mathematical models (both detailed and simplified for analysis), simulations of the time behaviour and spatial distribution of intracellular signaling molecules, and experimental validation (with experimental collaborators).I plan to (1) further develop models for feedback between signaling proteins (Rho GTPases Cdc42, Rac, Rho), lipids (phosphoinositides PIP2, PIP3), and actin (2) validate such models in further rounds of microfluidic cell polarization experiments carried out by Andre Levchenko (J. Hopkins), (3) simulate the revised models in1D and in 2D cell motility computations (with Stan Maree and post-doctoral fellows), (4) develop new models for GTPase dynamics in cell division (with Karen Oegema), in structures such as invadopodia (with John Condeelis) , and in single-cell wounds (with W Bement), (5) further extend modeling techniques to GTPase signaling in the context of cofilin activation and a burst of protrusive activity in mammary carcinoma cells (with John Condeelis). HQP training will be involved in every aspect of the research.Mathematical modeling has emerged as an important tool in the service of cell biology. It can help to formalize and test hypotheses, to suggest and design new experiments, and to predict variables that are not easy to measure experimentally. My work uses modeling, analysis, computations, and detailed collaboration with experts that can supply data and carry out new experiments.
Programme
Discovery Grants Program - Individual
Emplacement
British Columbia, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data

Tel que publié

Application id
41870-2012
Name nom
EdelsteinKeshet, Leah
Department département
Mathematics
Organization id
2
Institution établissement
University of British Columbia
Province en
British Columbia
Province fr
Colombie-Britannique
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2014
Competition year année de concours
2012
Award amount
70000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
Discovery grants programs
Group fr
Programmes de subventions à la découverte
Committee code
1501
Committee name en
Genes, Cells and Molecules
Committee name fr
Gènes, cellules et molécules
Area of application code
1200
Area of application group en
Advancement of knowledge
Area of application group fr
Avancement des connaissances
Area of application en
Advancement of knowledge
Area of application fr
Avancement des connaissances
Research subject code
5100
Research subject group en
Cell biology
Research subject group fr
Biologie cellulaire
Research subject en
Cell biology
Research subject fr
Biologie cellulaire
Partie
3
Nb partie
5
Application title
Computational models of eukaryotic cell polarization/motility
Keyword
NSERC
Application summary
Cell motility is of fundamental importance in development, immune surveillance, and wound healing in eukaryotes. It also plays a nefarious role in metastasis in cancer. The actin cytoskeleton, which shapes the cell and drives protrusive motility is regulated by layers of signaling pathways. A focal question that motivates my research is how spatio-temporal dynamics of such signaling molecules are coordinated, and how these then combine to produce directed cell motility. My work includes derivation and analysis of mathematical models (both detailed and simplified for analysis), simulations of the time behaviour and spatial distribution of intracellular signaling molecules, and experimental validation (with experimental collaborators).I plan to (1) further develop models for feedback between signaling proteins (Rho GTPases Cdc42, Rac, Rho), lipids (phosphoinositides PIP2, PIP3), and actin (2) validate such models in further rounds of microfluidic cell polarization experiments carried out by Andre Levchenko (J. Hopkins), (3) simulate the revised models in1D and in 2D cell motility computations (with Stan Maree and post-doctoral fellows), (4) develop new models for GTPase dynamics in cell division (with Karen Oegema), in structures such as invadopodia (with John Condeelis) , and in single-cell wounds (with W Bement), (5) further extend modeling techniques to GTPase signaling in the context of cofilin activation and a burst of protrusive activity in mammary carcinoma cells (with John Condeelis). HQP training will be involved in every aspect of the research.Mathematical modeling has emerged as an important tool in the service of cell biology. It can help to formalize and test hypotheses, to suggest and design new experiments, and to predict variables that are not easy to measure experimentally. My work uses modeling, analysis, computations, and detailed collaboration with experts that can supply data and carry out new experiments.