Grant: Project Grant
University of British Columbia
$990,676.00
Sequence-based Ancestry Inference, Multi-genome Synteny Detection, and Interactive Visualization
EF 2024-25
Résumé
Decoding human DNA has become routine, but analyzing it effectively remains challenging. Our six-billion-letter genetic code not only determines our biology but also carries the story of our ancestry. This ancestral information is crucial for personalized medical care - it can help predict disease risks and guide treatment choices. However, current computational tools struggle to handle the complexity of modern DNA data, especially for people with mixed ancestral backgrounds or when analyzing multiple genomes simultaneously.
We propose to develop three innovative computational tools to address these challenges. First, we will create methods that can quickly and accurately determine a patient's genetic ancestry from their DNA sequence, working with data from any sequencing platform. Second, we will develop a technology to compare hundreds of genomes simultaneously, revealing important structural differences between them. Third, we will build user-friendly visualization tools that help clinicians and researchers understand these complex relationships. These advances will help healthcare providers choose the most appropriate reference genomes for each patient, leading to more accurate diagnosis and treatment plans.
Our tools will be particularly valuable for analyzing diverse populations in Canada and understanding how genetic variations influence health outcomes across different ancestral backgrounds. By making these tools freely available to the research community, we aim to accelerate the adoption of ancestry-aware approaches in precision medicine.
Programme
Project Grant
Bénéficiaire
Emplacement
British Columbia, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
CIHR Funding Decisions Database
Tel que publié
Id
524284
Name
Birol Inanc
Region
British Columbia
Country
Canada
Orgtype
Research Institution; Institution Paid
Instname2
Genetics
Theme2
Biomedical
Prcname2
Genomics: Systems and computational biology
Projecttitle
Sequence-based Ancestry Inference, Multi-genome Synteny Detection, and Interactive Visualization
Programtype2
Operating Grants
Orgnameinp2
University of British Columbia
Cihramount2
$990,676
Cihrequipment2
$0
Programname2
Project Grant
Keyworddelim
Bioinformatics; Genomic Ancestry; Genomics; Population Genetics
Abstract
Decoding human DNA has become routine, but analyzing it effectively remains challenging. Our six-billion-letter genetic code not only determines our biology but also carries the story of our ancestry. This ancestral information is crucial for personalized medical care - it can help predict disease risks and guide treatment choices. However, current computational tools struggle to handle the complexity of modern DNA data, especially for people with mixed ancestral backgrounds or when analyzing multiple genomes simultaneously.
We propose to develop three innovative computational tools to address these challenges. First, we will create methods that can quickly and accurately determine a patient's genetic ancestry from their DNA sequence, working with data from any sequencing platform. Second, we will develop a technology to compare hundreds of genomes simultaneously, revealing important structural differences between them. Third, we will build user-friendly visualization tools that help clinicians and researchers understand these complex relationships. These advances will help healthcare providers choose the most appropriate reference genomes for each patient, leading to more accurate diagnosis and treatment plans.
Our tools will be particularly valuable for analyzing diverse populations in Canada and understanding how genetic variations influence health outcomes across different ancestral backgrounds. By making these tools freely available to the research community, we aim to accelerate the adoption of ancestry-aware approaches in precision medicine.
Competitiondate
202503
Approvedterm2
5 yrs 0 mth
Pinamesdelim
Birol, Inanc
Approvedterm
5 ans 0 mois
Cihrcontribution2
~ $990,676~ $0~