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Grant: Discovery Grants Program - Individual

Trent University

$41,000.00

Influence of local adaptation and demographic constraints on patterns of wildlife disease spread

EF 2014-15

Résumé
Climatic changes are altering disease dynamics for many species. It is unclear, however, what capacity species have to adapt to these changes, nor the influence patterns of natural genetic variation have on disease spread. Herein, I propose to study interactions between host immune gene variation, disease variants, and neutral population genetic parameters to enhance our understanding of how species respond to rapidly changing disease dynamics, constraints on these processes, and patterns of disease spread. Arctic rabies (AR) provides a model system to understand the capacity for northern species to respond to rapid changes in disease patterns where climatic changes are having a pronounced effect on the dynamics of AR. The AR system includes multiple hosts with contrasting patterns of disease susceptibility and temporal disease exposure, making it possible to test hypotheses regarding the genetic interactions of AR with its hosts. Further, this system presents contrasts in the localization and spread of disease across its circumpolar distribution. Specifically, we will assess: 1) immunogenetic variation derived from adaptive immunity genes and innate immunity genes of hosts using sequence capture and next generation sequencing technologies, 2) whole genome profiling of AR strains from infected hosts, 3) and neutral genes to provide insight into contemporary and historical demographic processes within and among the populations and demographic constraints on local adaptation. This research is innovative by taking the multi-pronged approach of integrating studies of natural genetic variation in hosts and pathogens towards understanding wildlife disease spread, an approach that can be extended to other disease systems. These questions are of practical relevance to Canada given human health impacts from wildlife disease on northern populations and effects on wildlife health and persistence.
Programme
Discovery Grants Program - Individual
Bénéficiaire
Emplacement
Ontario, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
NSERC's Awards Data

Tel que publié

Application id
RGPIN-2014-04321
Name nom
Kyle, Christopher
Department département
Forensic Science Department
Organization id
32
Institution établissement
Trent University
Province en
Ontario
Province fr
Ontario
Country en
CANADA
Country fr
CANADA
Fiscal year exercice financier
2014
Competition year année de concours
2014
Award amount
41000
Program id
RGPIN
Program name en
Discovery Grants Program - Individual
Program name fr
Programme de subventions à la découverte - individuelles
Group en
Discovery grants programs
Group fr
Programmes de subventions à la découverte
Committee code
1501
Committee name en
Genes, Cells and Molecules
Committee name fr
Gènes, cellules et molécules
Area of application code
102
Area of application group en
Agriculture and primary food production
Area of application group fr
Agriculture et produits alimentaires primaires
Area of application en
Animal management (animal diseases, breeding)
Area of application fr
Gestion des animaux (maladies animales, reproduction)
Research subject code
5005
Research subject group en
Genetics
Research subject group fr
Génétique
Research subject en
Evolutionary genetics
Research subject fr
Génétique évolutive
Partie
1
Nb partie
1
Application title
Influence of local adaptation and demographic constraints on patterns of wildlife disease spread
Keyword
NSERC
Application summary
Climatic changes are altering disease dynamics for many species. It is unclear, however, what capacity species have to adapt to these changes, nor the influence patterns of natural genetic variation have on disease spread. Herein, I propose to study interactions between host immune gene variation, disease variants, and neutral population genetic parameters to enhance our understanding of how species respond to rapidly changing disease dynamics, constraints on these processes, and patterns of disease spread. Arctic rabies (AR) provides a model system to understand the capacity for northern species to respond to rapid changes in disease patterns where climatic changes are having a pronounced effect on the dynamics of AR. The AR system includes multiple hosts with contrasting patterns of disease susceptibility and temporal disease exposure, making it possible to test hypotheses regarding the genetic interactions of AR with its hosts. Further, this system presents contrasts in the localization and spread of disease across its circumpolar distribution. Specifically, we will assess: 1) immunogenetic variation derived from adaptive immunity genes and innate immunity genes of hosts using sequence capture and next generation sequencing technologies, 2) whole genome profiling of AR strains from infected hosts, 3) and neutral genes to provide insight into contemporary and historical demographic processes within and among the populations and demographic constraints on local adaptation. This research is innovative by taking the multi-pronged approach of integrating studies of natural genetic variation in hosts and pathogens towards understanding wildlife disease spread, an approach that can be extended to other disease systems. These questions are of practical relevance to Canada given human health impacts from wildlife disease on northern populations and effects on wildlife health and persistence.