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Grant: Banting Postdoctoral Fellowship Program

Université de Sherbrooke

$140,000.00

A new ultra-high resolution 3D digital atlas of the human brain connectome derived from the 3D-PLI dataset and its application to the validation of diffusion MRI fiber tracking

EF 2018-19

Résumé
Research on human brain connections use three dimensional (3D) images of the brain obtained through magnetic resonance imaging (MRI). A brain connections atlas is an essential tool in that research field. It is composed of a set of digital maps which describe brain anatomy and identify the connections between functional regions of the brain. We propose to build an ultra-high resolution atlas of the human brain connections. Recently, the 3D-PLI dataset as been produced in Germany. It is a 3D digital image of the human brain fibers with unparalleled 3D resolution. It reveals 3D details that are 2.5 million times smaller than a regular MRI volume. However, at present it is only an image, not an atlas. For it to be an atlas, we have to identify in 3D every fiber connection and group them into family of fibers towards a functional region of the brain (such as "visual cortex" or "memory area"). This will allow the 3D-PLI dataset to be used in a variety of brain research and clinical applications and also to be used for teaching purposes such as training medical students in the 3D brain connectivity. For research, the ultra-high resolution of the atlas will be used as a template to interpret and validate the lower-resolution MRI images that we use to identify the fiber connections in the brain. This will help to understand brain development in children and the neurodegenerative diseases such as Alzheimer's Disease. We will also use the atlas as a guide to the study of normal brain functions, such as sensation (vision, hearing), memory and language. For clinical applications, the new atlas will be most useful as a guide to neurosurgeons who always make use of brain atlases to plan their surgery. This is typically done using 2D atlas pages in a book, thus restricting the angle of view. The 3D-PLI digital atlas will allow them to view from any angle the relevant brain connections between areas, making it much easier to get the information they need for surgical planning.
Programme
Banting Postdoctoral Fellowship Program
Emplacement
Quebec, Canada
Type de bénéficiaire
Academia
Type
Grant
Source
CIHR Funding Decisions Database

Tel que publié

Id
392431
Name
Fournier Marc
Region
Québec
Country
Canada
Orgtype
Institution Paid; Research Institution
Instname2
Neurosciences, Mental Health and Addiction
Theme2
Biomedical
Prcname2
Banting Postdoctoral Fellowships Program
Projecttitle
A new ultra-high resolution 3D digital atlas of the human brain connectome derived from the 3D-PLI dataset and its application to the validation of diffusion MRI fiber tracking
Programtype2
Fellowship Programs
Orgnameinp2
Université de Sherbrooke
Cihramount2
$140,000
Cihrequipment2
$0
Programname2
Banting Postdoctoral Fellowship Program
Keyworddelim
3d Polarized Light Imaging; Brain Image Processing; Diffusion Tensor Imaging; Functional Neuroanatomy; Human Brain Mapping; Human Connectome Project; Magnetic Resonance Imaging; Postmortem Brain Microstructures; Single Nerve Fibers Mapping; White Matter Fiber Tractography
Abstract
Research on human brain connections use three dimensional (3D) images of the brain obtained through magnetic resonance imaging (MRI). A brain connections atlas is an essential tool in that research field. It is composed of a set of digital maps which describe brain anatomy and identify the connections between functional regions of the brain. We propose to build an ultra-high resolution atlas of the human brain connections. Recently, the 3D-PLI dataset as been produced in Germany. It is a 3D digital image of the human brain fibers with unparalleled 3D resolution. It reveals 3D details that are 2.5 million times smaller than a regular MRI volume. However, at present it is only an image, not an atlas. For it to be an atlas, we have to identify in 3D every fiber connection and group them into family of fibers towards a functional region of the brain (such as "visual cortex" or "memory area"). This will allow the 3D-PLI dataset to be used in a variety of brain research and clinical applications and also to be used for teaching purposes such as training medical students in the 3D brain connectivity. For research, the ultra-high resolution of the atlas will be used as a template to interpret and validate the lower-resolution MRI images that we use to identify the fiber connections in the brain. This will help to understand brain development in children and the neurodegenerative diseases such as Alzheimer's Disease. We will also use the atlas as a guide to the study of normal brain functions, such as sensation (vision, hearing), memory and language. For clinical applications, the new atlas will be most useful as a guide to neurosurgeons who always make use of brain atlases to plan their surgery. This is typically done using 2D atlas pages in a book, thus restricting the angle of view. The 3D-PLI digital atlas will allow them to view from any angle the relevant brain connections between areas, making it much easier to get the information they need for surgical planning.
Competitiondate
201809
Approvedterm2
2 yrs 0 mth
Pinamesdelim
Fournier, Marc
Approvedterm
2 ans 0 mois
Cihrcontribution2
~ $140,000~ $0~